Gene Information

Name : GC56T3_2368 (GC56T3_2368)
Accession : YP_003671914.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2494580 - 2496628 bp
Length : 2049 bp
Strand : -
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; KEGG: gyc:GYMC61_1967 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase

DNA sequence :
GTGAACGAAGCGATGCAGCAGCCGGTGACGGCGGTCAAAGGCATCGGTGAAGAGACGGCGGCCGCGCTTGCCGACATCGG
CATCGCGACGGTCGGTGAGCTGCTTGCGTACGCCCCGTACCGCTATGATGATTACGAACAAAAAGATTTGGCCGTCGTCC
GCCATGAAGAAAAAGTGACAGTGGAAGGAAAAGTATACAGCGCCCCGCTGTTGACGTATTACGGAAAGAAAAAATCGCGC
CTTTCCTTCCGCATGCTGGCCGATCGCTACTTGATCACCGTTGTTTGTTTCAACCGTCCCTATTTGAAGGAAAAAATCGC
CCTGAACGAGACGGTGACGGTGATCGGCAAATGGGACCGGCATCGGCAAGCGATCAACGCCTACGAACTTCGGTTCGGAC
CGGCTCCGGAGACCACCGGCATCGAGCCGGTTTACTCCGTGCGCAGCCCGCTGACGGTGAAAACGATGCGCCGGTTGATG
AAAGCGGCGTTCGAACAGTTTGGCGAGCACATCCCCGACCTGCTGCCGCCCGCTTTGCGCCGCGCTTATCGCCTTGTCGA
CAAACAAGAAGCGCTCCGCGCCCTTCATTTTCCGCGCACGCGCGAAGAGTTGCATCAGGCGCGGCGCCGGCTCATCTATG
AGGAGTTTTTGTTGTACCAGCTGAAAATGCAGGCGCTCCGTCGATTGATGCGCGATGAGCGGCGCGGCGTCGTTCATTCG
TTTTCTGAAGAGCGGCTTTCGTCCTTTCTTTCCGGATTGCCGTTTGTCTTGACGAACGCCCAGCGCCGCGTCATCGGCGA
AATTTTGGCGGACATGCGCTCGCCGCGGCAAATGAACCGGCTTTTGCAAGGCGACGTCGGTTCTGGCAAGACGGTCGTTG
CCGCTGTCGCTCTTTACGCCGCCGCTTTGTCCGGATTTCAAGGAGCGCTGATGGTGCCGACGGAAATTCTGGCTGAACAG
CACGCCCGCTCGCTCGCCGAGCTGTTTGCCGATACGGATGTGACGATTGCGCTCTTGACAAGCTCAGTGAAGGGAAAGCA
GCGCAAAGCGGTGCTTGCCGAACTGGAAGAAGGAACAATTGATATCGTCGTAGGCACGCACGCCTTGATTCAAGAAGGAG
TGCAGTTTCACAGGCTCGGCCTCGTGATTACGGACGAGCAGCACCGGTTTGGCGTCGAACAGCGCCGCGTTTTGCGTGAG
AAAGGGCATGCACCGGATGTATTGATGATGACGGCGACGCCGATTCCGCGCACACTCGCCATTACAGCGTTCGGCGACAT
GGACGTATCGGTGCTCGATGAAATGCCGGCCGGACGAAAAAAAGTCGAGACGTATTGGGTGAAGCATCATCAGTTCTCCC
GCGTGCTCGATTTTATCGAAAAGGAATTGCGCCGTGGTCATCAGGCGTATGTCATCTGTCCGCTCATTGAGGAGTCGGAC
AAATTGGATGTGCAAAACGCCATCGATGTCCATAGCCAGCTTGTCCATTATTATCGCGGGAAATATGAGATCGGCTTGAT
GCACGGCCGGCTGTCGGCCGACGAAAAAGAACGCGTCATGCGGGCGTTCAGCGAAAACCGCATCCATGTGCTCGTCTCGA
CGACGGTCGTTGAAGTCGGCGTGAATGTACCGAATGCGACGGTGATGGTCATTTACGACGCCGAACGGTTTGGCCTCGCC
CAGCTCCATCAGCTGCGCGGGCGGGTCGGGCGCGGCGACGCCCAGTCGTACTGCATTTTGATCGCCGACCCGAAATCGGA
AGTCGGCAAAGAACGAATGCGCATCATGACGGAAACGGCCGATGGGTTTGTGTTGGCCGAAAAAGATTTGGAGCTGCGCG
GTCCGGGCGATTTTTTCGGTACAAAACAAAGCGGGCTCCCGGAATTCCGCTACGGCGATCCAGTGCATGATTACCGTATT
TTGGAAGTCGCCCGCCGCGATGCCGCCAAGCTCGTTTCCTCGGCCGCGTTTTGGCGCGATGAGGCGTACGCCGGGCTGCG
CGCCGAGCTGGAAGCGTCCGGCCTACTCGACGGGGAAAAGCTAGATTAA

Protein sequence :
MNEAMQQPVTAVKGIGEETAAALADIGIATVGELLAYAPYRYDDYEQKDLAVVRHEEKVTVEGKVYSAPLLTYYGKKKSR
LSFRMLADRYLITVVCFNRPYLKEKIALNETVTVIGKWDRHRQAINAYELRFGPAPETTGIEPVYSVRSPLTVKTMRRLM
KAAFEQFGEHIPDLLPPALRRAYRLVDKQEALRALHFPRTREELHQARRRLIYEEFLLYQLKMQALRRLMRDERRGVVHS
FSEERLSSFLSGLPFVLTNAQRRVIGEILADMRSPRQMNRLLQGDVGSGKTVVAAVALYAAALSGFQGALMVPTEILAEQ
HARSLAELFADTDVTIALLTSSVKGKQRKAVLAELEEGTIDIVVGTHALIQEGVQFHRLGLVITDEQHRFGVEQRRVLRE
KGHAPDVLMMTATPIPRTLAITAFGDMDVSVLDEMPAGRKKVETYWVKHHQFSRVLDFIEKELRRGHQAYVICPLIEESD
KLDVQNAIDVHSQLVHYYRGKYEIGLMHGRLSADEKERVMRAFSENRIHVLVSTTVVEVGVNVPNATVMVIYDAERFGLA
QLHQLRGRVGRGDAQSYCILIADPKSEVGKERMRIMTETADGFVLAEKDLELRGPGDFFGTKQSGLPEFRYGDPVHDYRI
LEVARRDAAKLVSSAAFWRDEAYAGLRAELEASGLLDGEKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-88 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2368 YP_003671914.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-82 42