Gene Information

Name : GC56T3_2363 (GC56T3_2363)
Accession : YP_003671909.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2491005 - 2491748 bp
Length : 744 bp
Strand : -
Note : KEGG: gyc:GYMC61_1972 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGCTTGAAGGAAAAATGGCGCTCGTCACCGGAGCATCGCGCGGCATTGGCCGGGCGGTCGCTCTGGAGCTTGCCCGCCA
AGGGGCGAACGTTGCCGTCAATTACGCCGGCAGCGAGGCGAAAGCGAATGAAGTTGTCGAGGCCATCCGCTCGCTCGGCC
GCGAAGCGATCGCCGTGCAGGCGGACGTCGCCCGCGCTGAAGATGTTGAGCGCATGGTGAAAACGACGATTGACCATTTT
GGCCGCCTCGATATTTTGGTCAACAACGCCGGCATTACACGCGACAATTTATTGATGCGGATGAAAGAAGAAGAATGGGA
TGCCGTGATTAACACGAATTTAAAAGGGGTATTTCTTTGTACGAAGGCGGCAACGCGCCCGATGATGAAGCAGCGCTATG
GGCGGATCGTCAACATTGCTTCGGTCGTCGGCGTGATCGGCAATCCGGGGCAGGCGAACTATGTCGCCGCCAAGGCCGGC
GTCATCGGGCTGACGAAGACGGCGGCGCGCGAACTCGCCAGCCGCAACATCACCGTTAACGCCGTCGCACCAGGATTCAT
TACGACCGATATGACCGAAGCGCTCAGCCCGGAGCTGAAGGCGGAAATGTTAAAGCAAATTCCGCTCGCCCGCTTTGGCG
AGCCGGATGATGTCGCCCGCGTCGTCGCTTTCCTCGCTTCCGACGCCGCGAGCTACATGACCGGACAGACGCTTCATGTT
GACGGCGGCATGGTGATGCCGTAA

Protein sequence :
MLEGKMALVTGASRGIGRAVALELARQGANVAVNYAGSEAKANEVVEAIRSLGREAIAVQADVARAEDVERMVKTTIDHF
GRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGVFLCTKAATRPMMKQRYGRIVNIASVVGVIGNPGQANYVAAKAG
VIGLTKTAARELASRNITVNAVAPGFITTDMTEALSPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMTGQTLHV
DGGMVMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-37 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-35 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 41