Gene Information

Name : GC56T3_2172 (GC56T3_2172)
Accession : YP_003671720.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : transposase, IS605 OrfB family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0675
EC number : -
Position : 2293975 - 2295087 bp
Length : 1113 bp
Strand : -
Note : KEGG: gyc:GYMC61_1508 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB

DNA sequence :
ATGCATAAAGCCTACCGCTTTCGGCTGTATCCTACCCAAAAACAAGCGAAGCTCATCAATGAGACGATTGGGTGCTGCCG
ATTTGTGTACAACCACTTTTTGGCCGAGTGGAATCAGGCGTATGAAACCACCGGAAGAGGACTCGGCTATAACGAGTGCT
CCAAGCAGCTGACCGCCTTAAAGCAAACCCTTCCATGGTTGAAGACACCTGATTCGACCGCCTTGCAAAACGCGCTGCAG
CAACTGGCCGAGGCGTTTGACCGGTTCTTTGATGGAACGTCGAACGCTCCCCGCTTCAAGAGCAAAAAACATCCGAACCA
ATCGTACACCGCTCAGTGCAACTACCCCAAGAACGGACGACCCACGATCGAAGTGGACGGCCATCGCTTGAAGCTTCCCA
AGCTCGGATGGGTGAAGTTCGCCAAAAGCCGTGAGGTTCAAGGCCGCATCCTCTCGGCCACCATTCGTCGCAATCGAACA
GGGAAGTATTTCGTCTCCATCCTCGTGGAAACGGACATTCCCCCATTGCCCCAAACCGACAAGAAAGTGGGCGTCGATTT
GGGATTGAAACATATCGTGGTGCTTTCCACAGGCGAAACGATCGAACACCCCCGGTATTGGCGCCGGTATGAAGAAAAGC
TCGCCTACTGGCAGCGGGTGATGTCCCGCCGCAAGCCGGGCGGTTCGAACTGGGAGAAAGCCCGTTTGAAAGTGGCCAAG
CTTCATGAAAAAATCGCCAACTGCCGGAACGATTTCCTGCACAAACTGTCCACCCGCCTCATCCGCGAAAACCAAGTGGT
GTGCGTGGAGGACTTGCGTGTTAGGAACATGCAAAAGAACCGCAAGCTGGCCAAATCCATTTCTGATTCCGCGTGGGGGC
GTTTTCTCAACATGCTTGAGTATAAAGCGACATGGTACGGGCGGACGGTGGTTCGTGTTGCGAGCACGTTTCCCTCGAGT
CAATTGTGCTCGTGCTGCGGGCACCGGCAGGTTGAGGTGAAGTCGCTCGGCATCCGCGAGTGGGTGTGCCCCACCTGCGG
AGCCGAACATGACCGGGACCATAACGCCGCCCGGAATATCCTGAATGAAGGGCTTCGTTTGCTGTCTTTGTAA

Protein sequence :
MHKAYRFRLYPTQKQAKLINETIGCCRFVYNHFLAEWNQAYETTGRGLGYNECSKQLTALKQTLPWLKTPDSTALQNALQ
QLAEAFDRFFDGTSNAPRFKSKKHPNQSYTAQCNYPKNGRPTIEVDGHRLKLPKLGWVKFAKSREVQGRILSATIRRNRT
GKYFVSILVETDIPPLPQTDKKVGVDLGLKHIVVLSTGETIEHPRYWRRYEEKLAYWQRVMSRRKPGGSNWEKARLKVAK
LHEKIANCRNDFLHKLSTRLIRENQVVCVEDLRVRNMQKNRKLAKSISDSAWGRFLNMLEYKATWYGRTVVRVASTFPSS
QLCSCCGHRQVEVKSLGIREWVCPTCGAEHDRDHNAARNILNEGLRLLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0626 YP_697953.1 ISCpe2, transposase orfB Not tested Not named Protein 3e-78 48