Gene Information

Name : GC56T3_2087 (GC56T3_2087)
Accession : YP_003671645.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2191493 - 2192545 bp
Length : 1053 bp
Strand : -
Note : PFAM: transporter permease; KEGG: gyc:GYMC61_2266 transporter permease

DNA sequence : 
ATGAAAAAATACATCACGGTCCGAATGGGAAAACACATCTCGTTTTTCTATGACAAAAAAGCTGTTGCGGTGCTCGCCGC
GCTCATAGCAGCGGCCGTCTTCCTTTTCGTTATCAGCATTGGCAGCGGCGAAATGCGCATGTCCCCGCTTGAGGCCGCTG
CCGCGCTGTTCGGATACGGAGAGGAAATTCATCAGACGGTGATTGTGACGTTCCGCCTGCCGCGCGTATTGGTTGCCTGG
CTGGCCGGAATGGCGCTGGCTGTCGCCGGCGCGGTTTTGCAAGGAATGGTGCGCAATCCGCTCGCTTCGCCGGATGTGCT
CGGCATCACCGGCGGAGCGGCGGCCGCGGTCGTTGGCTTTTTGGCGCTGTTTAGCGATGAAAACAACTCTTTGACCGTCA
GCATCCACTGGCTGCCGCTTGCCGCCTTTCTCGGCGCTACGGCCGCTGCTTGGCTCGTATATATGCTGGCGTGGAAAAAC
GGCCTCGCCCCGCTTCGGCTCGTGCTTGTCGGCATCGGCGTTTCTGCGCTCATGCAGGCGTTGACGACACTGTTGATGAT
CACAGGACCCATCTATCGGGCGAGCCAGGCAAACGTGTGGATTACGGGCAGTGTGTATGGTGCTTCTTGGCAGCACGTTT
CGCTCATGGCGCCATGGGTCATCGGACTGCTCCTTGTGGCGATGTTGGCCGCGCGGCATGTCAATGTGCAGGAGCTGGGC
GATGAGCTGGCGATTGGGCTTGGCGGCGCGGTCGAACGGCAACGGCTGGGACTTGTTTTGCTTAGCACCGCGCTCACCGG
CGGCGCGGTCGCTTTCGCCGGCGGCATCGGCTTTGTCGGGCTGATGGCGCCGCATATGGCGCGCCGCCTTGTCGGTTCGG
CGTTTGGCGCTCTTCTTCCGACCGCTGCGCTGTTAGGCGGCGTGCTCGTCATGGGGGCGGATTTGGCTGGGCGGCTGCTT
TTGGCGCCGACGGAAATTCCGGCCGGAGTGTTTACCGCGGCGATTGGAGCACCGTATTTCATTTATTTATTGTACCGAAG
TCGGAAATTATAA

Protein sequence : 
MKKYITVRMGKHISFFYDKKAVAVLAALIAAAVFLFVISIGSGEMRMSPLEAAAALFGYGEEIHQTVIVTFRLPRVLVAW
LAGMALAVAGAVLQGMVRNPLASPDVLGITGGAAAAVVGFLALFSDENNSLTVSIHWLPLAAFLGATAAAWLVYMLAWKN
GLAPLRLVLVGIGVSALMQALTTLLMITGPIYRASQANVWITGSVYGASWQHVSLMAPWVIGLLLVAMLAARHVNVQELG
DELAIGLGGAVERQRLGLVLLSTALTGGAVAFAGGIGFVGLMAPHMARRLVGSAFGALLPTAALLGGVLVMGADLAGRLL
LAPTEIPAGVFTAAIGAPYFIYLLYRSRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 9e-12 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2087 YP_003671645.1 transporter permease BAC0163 Protein 5e-12 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2087 YP_003671645.1 transporter permease VFG1043 Protein 5e-12 43