Gene Information

Name : GC56T3_2086 (GC56T3_2086)
Accession : YP_003671644.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2190668 - 2191480 bp
Length : 813 bp
Strand : -
Note : KEGG: gyc:GYMC61_2267 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGCATGGGTTGCAGGCGAAAGAGTTGACGCTATCCTATGGCGAGGCGATCGTTATTGACCGGTTGCATTTGACGATTCC
GAAAGGAAAAATCACGGTGTTCATCGGCGCGAACGGCTGCGGCAAGTCGACGTTGCTGCGCGCCTTGGCCCGGCTGCTAA
AACCAACAAGCGGCGCTGTGCTGCTGGATGGAAAAGAAATCGCCAAACAGCCGACAAAAGAAATCGCCCGCCGGCTCGCC
ATTTTGCCGCAGTCGCCTACGGCTCCGGAAGGACTGACCGTTTTGCAACTTGTGAAGCAAGGGCGCTACCCGTATCAAAC
GTGGTTCAAGCAATGGAGTGACGAAGATGAGCGAGCGGTTGTGCGGGCCCTAGAGGCAACTGGACTCGCCGAATTCGCCG
AGCGGCCGGTCGATTCGCTTTCCGGCGGACAGCGCCAACGCGCATGGATCGCCATGACATTAGCGCAAGAAACAGACATC
ATTTTGCTTGACGAGCCGACGACGTATTTGGATCTCGCGCATCAAATTGACATTTTAGATTTATTGTTTGAGCTGAATGA
AAAAGAACGGCGGACGATCGTCATGGTGCTTCACGATTTGAATTTAGCGTGCCGTTACGCCCATCATCTCGTCGCCATTC
GCGATAAAACGGTGTATGCCGAAGGAAAGCCGGAAGACGTCATTTCCCGCCAGCTCGTGAAAGATGTGTTCCAAATGGAT
TGCCAAATCACGTACGATCCGATCTTTGGCACCCCGCTTTGCATTCCGTATGGGAAAGGACGGCGAATTTTACAGAAAGA
AGGCGTATCGTGA

Protein sequence : 
MHGLQAKELTLSYGEAIVIDRLHLTIPKGKITVFIGANGCGKSTLLRALARLLKPTSGAVLLDGKEIAKQPTKEIARRLA
ILPQSPTAPEGLTVLQLVKQGRYPYQTWFKQWSDEDERAVVRALEATGLAEFAERPVDSLSGGQRQRAWIAMTLAQETDI
ILLDEPTTYLDLAHQIDILDLLFELNEKERRTIVMVLHDLNLACRYAHHLVAIRDKTVYAEGKPEDVISRQLVKDVFQMD
CQITYDPIFGTPLCIPYGKGRRILQKEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-63 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-63 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-62 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-57 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-57 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-57 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-57 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-52 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-53 46
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-52 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2086 YP_003671644.1 ABC transporter BAC0164 Protein 7e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_2086 YP_003671644.1 ABC transporter VFG0925 Protein 2e-66 53
GC56T3_2086 YP_003671644.1 ABC transporter VFG1042 Protein 6e-53 47