Gene Information

Name : GC56T3_1835 (GC56T3_1835)
Accession : YP_003671404.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1943317 - 1944069 bp
Length : 753 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2515 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGAGGCTGCAAGGAAAAGCGGCGATTGTCACCGGTGGCGCGAGCGGCATCGGCCGGGCGACGGCGATCCGCTTTGCGGA
AGAAGGCGCCAAAGTGGCGGTGAGCGACATCAATGAGGAAGGAGGGGAAGAAACGGTCCACCTGATTCGGGAAAAAGGAG
GGGAGGCGATTTTTGTCCAGACGGATGTCGCCGATTCCAAGCAAGTGAGCCGCCTTGTCCAAACGGCGGTTGATGTCTTT
GGCGGCCTACATATTCTCTTTAACAATGCCGGCATCGGCCATTCGGAAGTGCGGAGCACCGACTTGTCTGAAGAAGAGTG
GGACCGGGTCATCGATGTCAACTTAAAAGGCGTGTTTCTTGGCATCAAATATGCGGTGCCGGCACTGAAAGCATCCGGGG
GTGGGGCGATTGTCAACACGGCCAGCCTGCTCGGGCTGAAGGGAAAAAAATATCAAGCCGCCTACAACGCATCAAAAGCA
GGTGTCATTTTGTTAACTCAAAATGCCGCATTGGAATACGGGAAATTTAACATTCGCGTCAACGCCATTGCGCCGGGGGT
CATTGATACGAACATCATTACTCCGTGGAAACAAGATGAGCGCAAATGGCCGATCATCTCGAAGGCGAACGCCCTCGGCC
GCATCGGGACGCCAGAGGAAGTGGCGAACGCGGTGATGTTTTTGGCGTCCGATGAAGCGTCCTTTATCACCGGCGCGATA
TTGTCGGTCGACGGCGGCGGGCTGACGTTTTAG

Protein sequence : 
MRLQGKAAIVTGGASGIGRATAIRFAEEGAKVAVSDINEEGGEETVHLIREKGGEAIFVQTDVADSKQVSRLVQTAVDVF
GGLHILFNNAGIGHSEVRSTDLSEEEWDRVIDVNLKGVFLGIKYAVPALKASGGGAIVNTASLLGLKGKKYQAAYNASKA
GVILLTQNAALEYGKFNIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVMFLASDEASFITGAI
LSVDGGGLTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-38 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-36 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-36 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 9e-37 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-37 41