Gene Information

Name : GC56T3_1664 (GC56T3_1664)
Accession : YP_003671242.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 1766446 - 1767783 bp
Length : 1338 bp
Strand : +
Note : TIGRFAM: xylose isomerase; KEGG: gyc:GYMC61_2688 xylose isomerase; PFAM: xylose isomerase

DNA sequence :
ATGGCGTATTTCCCGAATATCGGCACCATTCCATATGAAGGACCGGAGTCGCGCAATCCGTTGGCGTTTAAGTTTTATAA
TCCGGAAGAAAAAGTCGGCGACAAAACAATGGAGGAGCATTTGCGCTTTTCGGTCGCCTATTGGCATACGTTCACGGGGG
ATGGATCGGATCCGTTTGGCGTCGGCAATATGATTCGTCCGTGGGACAAATACAGCGGCATGGATCTAGCAAAGGCGCGC
GTCGAGGCGGCGTTTGAGCTGTTTGAAAAGCTGAACGTTCCGTTTTTCTGCTTCCATGATGTCGACATCGCGCCGGAAGG
GGAAACGCTCAGCGAGACGTACAAAAACTTGGATGAAATCGTCGATATGATTGAAGTGTACATGAAAACAAGCAAAACGA
AACTGCTGTGGAATACGGCGAACTTGTTCAGCCATCCGCGCTTCGTTCACGGGGCAGCGACGTCGTGCAACGCCGATGTG
TTCGCCTATGCGGCGGCAAAAGTGAAAAAAGGACTCGAGATCGCCAAACGGCTCGGAGCGGAAAACTACGTGTTTTGGGG
CGGCCGGGAAGGTTATGAGACGCTCTTGAATACGGACATGAAGCTGGAGCTTGACAACTTAGCCCGCTTCTTGCACATGG
CGGTCGACTATGCGAAAGAAATCGGATTTGACGGCCAGTTTTTGATCGAGCCGAAGCCGAAAGAGCCGACGAAGCATCAA
TATGACTTCGATGTGGCGACGGCGTTGGCGTTCTTGCAAACATACGGGCTCAAGGATCATTTCAAATTCAACATTGAAGC
GAACCATGCGACATTGGCCGGGCATACGTTTGAGCATGAGCTGCGCGTCGCCCGCATTCATGGCATGTTGGGCTCGGTCG
ATGCCAACCAAGGCGATACGCTGCTCGGCTGGGATACGGATGAGTTCCCGACAGATTTGTATGCGACGACGCTGGCGATG
TATGAAATTTTGCAAAACGGTGGTCTTGGGCGCGGCGGCTTGAACTTTGATGCGAAAGTGCGGAGAGGCTCGTTTGAACC
GGAGGACTTGTTCTACGCTCATATCGCCGGGATGGACAGCTTTGCGATTGGTTTGAAAGTCGCTCATCGCTTGCTGGAAG
ACCGCGTGTTTGAACAGTTCATCGAAGAACGGTACAAAAGCTATACAGAAGGCATCGGCCGCGAGATCGTCGAAGGGACG
GCGGACTTCAAAAAGCTTGAGGAGTACGCCTTGCAGCTCGGCGAAATTCGCAATGCGTCCGGCCGTCTCGAACGCTTGAA
AACGCTGCTCAACCAATATTTGTTGGAAGTCAGCGTGCCGAGCGTATCCCGTTCGTGA

Protein sequence :
MAYFPNIGTIPYEGPESRNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGVGNMIRPWDKYSGMDLAKAR
VEAAFELFEKLNVPFFCFHDVDIAPEGETLSETYKNLDEIVDMIEVYMKTSKTKLLWNTANLFSHPRFVHGAATSCNADV
FAYAAAKVKKGLEIAKRLGAENYVFWGGREGYETLLNTDMKLELDNLARFLHMAVDYAKEIGFDGQFLIEPKPKEPTKHQ
YDFDVATALAFLQTYGLKDHFKFNIEANHATLAGHTFEHELRVARIHGMLGSVDANQGDTLLGWDTDEFPTDLYATTLAM
YEILQNGGLGRGGLNFDAKVRRGSFEPEDLFYAHIAGMDSFAIGLKVAHRLLEDRVFEQFIEERYKSYTEGIGREIVEGT
ADFKKLEEYALQLGEIRNASGRLERLKTLLNQYLLEVSVPSVSRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 2e-125 63
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-125 63