Gene Information

Name : GC56T3_1605 (GC56T3_1605)
Accession : YP_003671185.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1686904 - 1688352 bp
Length : 1449 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2758 betaine-aldehyde dehydrogenase

DNA sequence :
ATGATATACGTCAACGGAAAATGGAGCAAAGGAGAAGGAAAAAAAAGACCGATCATCAATCCGGCGAATGAGGAAATCAT
TATAGAAATCAATGAAGCATCCCAACAACAAGCCGTAGAAGCGATCCAAGCAGCTCGTCATGCCTTTCAATATACCGATT
GGCCATTCAATCCAGCAAAACGGATCGCTGCGCTTCGCCAATTGGCGGACCTGTTGGAACAAAACGCGGAAACATTCGCT
TCGATCGAGACGTTGAATACAGGAAAACCGATTCGCGAGTCGCGCCTCGATGTCAGCGATTCAATCCAATGCCTTCGTTA
CTACGCCGATTTTGTTGAGCAACGGGCCATCGAGGAAACCAAAAGAACCGATGGCACGACAAGCAAAATCATTGAGGAGC
CAATCGGGGTATGCGCGTTGATTGTTCCTTGGAATTTTCCTCTCTTGTTAGGAATATGGAAACTGGCTCCAGCGCTTGCG
GCTGGAAATACAGTGGTGTTTAAACCATCAGAACTGACTCCGTTATCGTTCATAGAACTGACAAAGCTGATCGATTCCAT
CGGTCTCCCGCCGGGCGTGTTTAATCTTGTTCCTGGAGGCGGTTCGCCGGTTGGAGAAACATTGGTGACACATCCTGATG
TGGAAAAAATATCGTTTACCGGCGGAACGGAAACCGGACGATGGATTTACGAACAAGGCGCTCGTCGCTTGAAGCGAGTG
TCTCTGGAACTCGGCGGCAAATCCCCGCTGCTCATTTTTGACGATGCGGATCTTACTAGCACCATCGAGTGGGCGCTGTT
TGCTTCCTTTCTCAATCAAGGAGAAGTGTGTGTGGCTGCTTCGCGAATTCTTGTTCAACGACACGTTTATGATTCGTTTA
TCGATCAGCTGATCAAAAGGCTGGCTTCCCTCCATATTGGAGATCCTTTCGAGGAAAACACTGAGATGGGACCATTAATC
AGCTCCTCACATTTAGAAAAAGTGGAAACGTATATCCAGATCGGCTTGCAGGAAGGAGGAGTACTGCTGCAGGGAGGAGA
ACGAATCAAAGAACGGGGGTATTATCTCACCCCTGCCGTTTTCGCCCATGTCCGTCAAGACATGCGCATCGTCCAAGAAG
AAATCTTTGGTCCTGTCATAACCGTACAACCGTTTGAACATGACGCAGAAGCCATCGGACTCGCGAACGATACGATATAC
GGACTAGCAGCTGGCATATTCAGCCGTGATCTCGAACGGGCGGAACAAATCGCCGGAAAATTGAGAGCAGGAACGATTTG
GATTAACAGCTATCATACTCCCTATGTCGATGCCCCTTGGGGAGGATTGAAACAAAGCGGAATCGGCCGGGAGCTTGGGC
CGCAAGGATTTACCGCTTTCACCGAAGCAAAACATGTCAACATCAGCCAACATGGCCACCCGCTCGGATGGTATTCGTCG
TATTCCTGA

Protein sequence :
MIYVNGKWSKGEGKKRPIINPANEEIIIEINEASQQQAVEAIQAARHAFQYTDWPFNPAKRIAALRQLADLLEQNAETFA
SIETLNTGKPIRESRLDVSDSIQCLRYYADFVEQRAIEETKRTDGTTSKIIEEPIGVCALIVPWNFPLLLGIWKLAPALA
AGNTVVFKPSELTPLSFIELTKLIDSIGLPPGVFNLVPGGGSPVGETLVTHPDVEKISFTGGTETGRWIYEQGARRLKRV
SLELGGKSPLLIFDDADLTSTIEWALFASFLNQGEVCVAASRILVQRHVYDSFIDQLIKRLASLHIGDPFEENTEMGPLI
SSSHLEKVETYIQIGLQEGGVLLQGGERIKERGYYLTPAVFAHVRQDMRIVQEEIFGPVITVQPFEHDAEAIGLANDTIY
GLAAGIFSRDLERAEQIAGKLRAGTIWINSYHTPYVDAPWGGLKQSGIGRELGPQGFTAFTEAKHVNISQHGHPLGWYSS
YS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-67 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-68 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_1605 YP_003671185.1 aldehyde dehydrogenase VFG0082 Protein 8e-68 43