Gene Information

Name : GC56T3_1429 (GC56T3_1429)
Accession : YP_003671023.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : rhodanese
Function : -
COG functional category : R : General function prediction only
COG ID : COG0491
EC number : -
Position : 1505794 - 1507203 bp
Length : 1410 bp
Strand : +
Note : KEGG: gyc:GYMC61_2913 beta-lactamase; PFAM: rhodanese; SMART: rhodanese

DNA sequence :
ATGTTCTTTCGTTCATTTTTTTATGAACAATTAGCTCATATGTCTTACTTAGTTGGATGCCAACGAACAGGTGAGGCAAT
CGTTATTGACCCAGGTCGCAGCGTTGATTGGTATATCGATACAGCGAAAAAAGAAGGATTGCGAATAGTAGCTGCAGCAG
AAACACACATCCATGCTGACTTCGTTTCAGGAGCCAAAGAATTAGCGAAATGTTGTGGAGCAAAACTGTATTTATCGGAT
GAAGGAGATGAGAACTGGAAATATCAATATTTAAATGAAGTTGATTACGAGCTTGTGAAGGAGGGAAGCATTTTTACAGT
AGGAAACGTTGAGTTTCAAGTGATTCATACACCAGGGCATACACCAGAGCATATTTCGTTCATCTTAACTGATAAAGGCG
GCGGCGCAAAAGAGCCGATGGGCATTTTTACAGGTGACTTCGTTTTTGTTGGGGACGTTGGCCGTCCGGACCTGCTTGAA
AAAGCAGCAGGGATTTCCGGCACAGCGGACATTGGCGCTCGTCAAATGTTCCAATCGCTAAAAAAATTCAAAGCACTCCC
AGATTATTTAAAAGTATGGCCGGCGCACGGAGCAGGAAGTGCATGCGGGAAGGCACTTGGTGCTGTTCCTTCTTCAACGG
TTGGATATGAAAAGCTGACCAACTGGGCGCTAAAAATTGAAGATGAAGAAGAGTTTGTGAAACTATTGCTTGCAGGGCAA
CCGGAGCCGCCGAAATATTTTGCAATGATGAAACAAGTGAATAAAATTGGTCCTGAATATTTGAATGAAAAAGAAGTACC
AGTGTTGTCAACACGTGAGCAACTCGACGAGTATCAAGCAAACGGAGCGTTTATTTTAGACGTTCGTCCGCCTCAAGAAT
TTGCGAATGCACATTATGCAGGGTCCATCAACATTCCGTTTAACAAATCATTTACAAACTGGGCAGGTTGGTTCATTAAC
TATGACCAAGACATTGTGTTGATTGCAAGTCAAGAAGATGTACAAGCGATTCGCAAAGCGCTTGCTTATATTGGATTGGA
CCGCATTGTTGCGTACATTGAACCAGTCGTTGCATTAAGCGGTGAAGTAGAGAGATATGAAGAAATTGATGTGCAACAAT
TGCGTCAATATTTACAAGACGAGCATTATCACCTTATTGATGTGCGCAATCAAGCAGAATGGGACGAAGGATATATTGAA
GGGGCGCAACATATTATGCTCGGCGCGCTTGCTGATCGTTTAAACGAGATTCCAGAAGGAAAAACGTACATTGTTCAATG
TCAATCAGGTGCGCGCTCAGCAATTGGCGCAAGTATCTTACAAGCAAAAGGGGTAAAACAGGTGCTGAATTTAAAAGGTG
GGTATTTAGCGTGGGTGCAAGAAAAGCTTCCAATTGCCAGAAAAGCATAA

Protein sequence :
MFFRSFFYEQLAHMSYLVGCQRTGEAIVIDPGRSVDWYIDTAKKEGLRIVAAAETHIHADFVSGAKELAKCCGAKLYLSD
EGDENWKYQYLNEVDYELVKEGSIFTVGNVEFQVIHTPGHTPEHISFILTDKGGGAKEPMGIFTGDFVFVGDVGRPDLLE
KAAGISGTADIGARQMFQSLKKFKALPDYLKVWPAHGAGSACGKALGAVPSSTVGYEKLTNWALKIEDEEEFVKLLLAGQ
PEPPKYFAMMKQVNKIGPEYLNEKEVPVLSTREQLDEYQANGAFILDVRPPQEFANAHYAGSINIPFNKSFTNWAGWFIN
YDQDIVLIASQEDVQAIRKALAYIGLDRIVAYIEPVVALSGEVERYEEIDVQQLRQYLQDEHYHLIDVRNQAEWDEGYIE
GAQHIMLGALADRLNEIPEGKTYIVQCQSGARSAIGASILQAKGVKQVLNLKGGYLAWVQEKLPIARKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0046 YP_184956.1 metallo-beta-lactamase Not tested Type-I SCCmec Protein 1e-92 43
unnamed BAA86645.1 hypothetical protein Not tested Type-I SCCmec Protein 9e-93 43
unnamed BAB83478.1 - Not tested SCC 12263 Protein 3e-93 43