Gene Information

Name : GC56T3_0952 (GC56T3_0952)
Accession : YP_003670571.1
Strain : Geobacillus sp. C56-T3
Genome accession: NC_014206
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1014781 - 1015914 bp
Length : 1134 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_0979 cystathionine gamma-lyase

DNA sequence :
ATGAGGCGGAAAACAATGCTCATTCATGGCGGCATTCCGGGGGATCCGCATACTGGAGCGGTGTCGGTCCCGATTTATCA
AGTGAGTACGTATAAGCAAGAAGAAGTTGGAAAGCATAAAGGGTTTGAATACTCGCGCACCGGCAACCCGACGCGCGCGG
CGCTTGAGAAGCTGATTGCCGATCTCGAGGGCGGCGAAGCCGGCTTTGCGTTCGCTTCCGGTATGGCGGCAATTACGGCC
GTCATGATGTTGTTTCAAAGCGGCGACCATCTGGTGCTCACTGACGATGTCTACGGCGGCACGTATCGCGTCATGACGAA
CGTGCTGAATCGGTTCGGGCTTGAGGCGACGTTCGTCGATACGAGCGATGTCGCCAACATCGAGGCGCACATCCGGCCGA
ATACGAAAGCCATCTATATCGAAACGCCGACGAACCCGCTGTTGAAAATCACTGACTTGCAAGCCGCCGCCGCCATTGCC
CGTGCGCATGGGCTGCTATTGATCGTCGATAACACGTTTTCCACTCCGTACTTTCAGACGCCGCTTGAGCTTGGCGCCGA
TATCGTCATTCATAGCGCAACGAAATATTTAGGCGGCCATAGCGACGTCGTCGCTGGGTTGGCGGTTGTCCGCACGCCGG
AGCTTGCCGAACGGCTCCATTACGTGCAAAATTCAACCGGCGGCGTGCTCGGGCCGCAAGATTCATGGCTATTGATGCGC
GGGATGAAAACGCTCGCCGTGCGGATGGAGGAACATGAAGAAAATGCGCGCCAAATCGCTGTTTTTTTGGCTGAACACAA
GGCGGTCAAGCGCGTCCATTACCCCGGGCTTCCGGATCATCCGAACCACGAGCTGGCGAAAAAACAAATGCGCGGATTTG
GCGGCATGATTTCGTTTGATGTCGGCAGCTTGGAGCGCGCCGAGAAAGTGCTGTCGCGCGTGCGCTACTTTACGCTTGCC
GAAAGCTTAGGGGCGGTCGAAAGTTTAATTTCGTTGCCAGGGAAAATGACGCACGCCTCGATCCCGAAGGAACGGCGCGA
ACAGCTCGGCATTACCGACGGCCTGATCCGTTTGTCGGTCGGGCTTGAAGATGTCAACGATCTGCTTGACGATTTGGCGC
AGGCGCTTGGCTGA

Protein sequence :
MRRKTMLIHGGIPGDPHTGAVSVPIYQVSTYKQEEVGKHKGFEYSRTGNPTRAALEKLIADLEGGEAGFAFASGMAAITA
VMMLFQSGDHLVLTDDVYGGTYRVMTNVLNRFGLEATFVDTSDVANIEAHIRPNTKAIYIETPTNPLLKITDLQAAAAIA
RAHGLLLIVDNTFSTPYFQTPLELGADIVIHSATKYLGGHSDVVAGLAVVRTPELAERLHYVQNSTGGVLGPQDSWLLMR
GMKTLAVRMEEHEENARQIAVFLAEHKAVKRVHYPGLPDHPNHELAKKQMRGFGGMISFDVGSLERAEKVLSRVRYFTLA
ESLGAVESLISLPGKMTHASIPKERREQLGITDGLIRLSVGLEDVNDLLDDLAQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-96 57
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-98 57
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-73 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GC56T3_0952 YP_003670571.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 7e-64 46