Gene Information

Name : Shell_1011 (Shell_1011)
Accession : YP_003669015.1
Strain : Staphylothermus hellenicus DSM 12710
Genome accession: NC_014205
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 974611 - 975330 bp
Length : 720 bp
Strand : -
Note : KEGG: gem:GM21_2025 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAAGAAGGTTATAGAACTAGTAGGGGTCAAAAAACTTTATAGAGTAGGAGAAGTAGTCACGTGGGGTTTGAGAGGAGT
AGACTTAAATGTATACGAAGGAGAGTTCATATCAATAATGGGGCCAAGCGGTTCAGGCAAAACAACACTGCTAAACATGA
TCGGATTACTAGATCATCCCACTGAAGGAAAAATACTAATAGACAGCATAGATGTTTCAAAACTAAAATCAAAACAACTA
GCTCGCATACGCAATATGAAAATAGGTTTTGTATTTCAATCATTTAACCTCATAAATAGGTTAACAGTTCTTGAAAATAT
TGAGTTACCTCTAATCGTTAGGAAAATCCCTAGGAAAGAAAGAATAGAAAGGGTCAAAAAAGCATTATTAATGGCTGGTG
GAGACTTATCATGGCTACCTAAACATCCAAACCAGCTTAGTGGTGGCCAGCAACAAAGAGTAGCCATTGCTAGAGCACTA
GTAGGTGAACCAGAGATAATACTAGCGGATGAACCCACTGGAAACCTAGATAGAAAATCAGCTAAGTCTGTTATTAAAAC
ATTTATAGATCTTAATCGCAAAGGACAAACAATTATAATGGTAACACATGATCCTGAAGTGGCTAATTGTACGCAGAAAA
TATACATATTGAGAGACGGAGTAATAATAAGAGAAGAAAAACCCGTACCTGATAAATGTATTCTTCAAACTGTGAAGTGA

Protein sequence : 
MKKVIELVGVKKLYRVGEVVTWGLRGVDLNVYEGEFISIMGPSGSGKTTLLNMIGLLDHPTEGKILIDSIDVSKLKSKQL
ARIRNMKIGFVFQSFNLINRLTVLENIELPLIVRKIPRKERIERVKKALLMAGGDLSWLPKHPNQLSGGQQQRVAIARAL
VGEPEIILADEPTGNLDRKSAKSVIKTFIDLNRKGQTIIMVTHDPEVANCTQKIYILRDGVIIREEKPVPDKCILQTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shell_1011 YP_003669015.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-49 49
Shell_1011 YP_003669015.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-42 45
Shell_1011 YP_003669015.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-36 44
Shell_1011 YP_003669015.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-34 42