Gene Information

Name : sph (BMB171_C0590)
Accession : YP_003663128.1
Strain : Bacillus thuringiensis BMB171
Genome accession: NC_014171
Putative virulence/resistance : Virulence
Product : sphingomyelin phosphodiesterase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3568
EC number : -
Position : 685705 - 686706 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence :
GTGAAAGGTAAATTGCTAAAAGGTGTACTTAGCTTAGGGGTTGGTTTAGGAGCTTTATATAGCGGAACTTCAGCTCAAGC
AGAAGCATCTACAAATCAAAATGATACATTAAAAGTGATGACGCATAATGTATATATGCTATCAACAAACTTATATCCGA
ACTGGGGACAAACTGAGCGTGCTGATTTAATCGGGGCGGCAGATTATATAAAGAATCAAGATGTTGTTATATTAAATGAA
GTGTTTGATAATAGCGCTTCAGATCGTTTATTAGGCAATTTGAAGAAAGAATATCCAAATCAAACAGCAGTATTAGGTCG
TAGTAGTGGAAGCGAATGGGATAAAACGTTAGGAAACTATTCATCTTCAACTCCTGAAGATGGTGGCGTTGCGATTGTGA
GCAAATGGCCAATCGCTGAAAAGATTCAATATGTATTTGCAAAAGGATGCGGGCCAGATAATTTATCGAATAAAGGATTT
GTATACACGAAAATTAAGAAAAATGATCGTTTCGTTCACGTGATTGGGACGCATTTGCAGGCTGAAGATAGTATGTGCGG
AAAAACTTCACCAGCATCTGTACGTACGAACCAATTAAAAGAAATTCAAGATTTTATTAAAAATAAAAATATACCAAATA
ATGAGTATGTGTTAATTGGTGGTGATATGAACGTAAATAAGATAAATGCAGAGAACAATAATGATTCAGAGTATGCATCT
ATGTTTAAAACATTGAACGCTTCTGTACCATCTTATACTGGACATACAGCGACTTGGGATGCAACGACAAACAGTATTGC
AAAATATAATTTCCCTGATAGTCCTGCCGAATATTTAGATTATATTATTGCAAGCAAAGACCATGCGAACCCATCGTATA
TAGAGAATAAGGTGTTACAGCCGAAATCTCCACAATGGACTGTTACATCGTGGTTCCAAAAATATACGTATAATGATTAC
TCTGATCATTATCCAGTAGAGGCGACTATTTCTATGAAGTAG

Protein sequence :
MKGKLLKGVLSLGVGLGALYSGTSAQAEASTNQNDTLKVMTHNVYMLSTNLYPNWGQTERADLIGAADYIKNQDVVILNE
VFDNSASDRLLGNLKKEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKGCGPDNLSNKGF
VYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYAS
MFKTLNASVPSYTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDY
SDHYPVEATISMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 3e-71 59
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 4e-71 59
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 3e-71 59
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 1e-77 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sph YP_003663128.1 sphingomyelin phosphodiesterase VFG1798 Protein 9e-79 59
sph YP_003663128.1 sphingomyelin phosphodiesterase VFG0674 Protein 7e-78 56