Gene Information

Name : xerD (BMB171_C3755)
Accession : YP_003666285.1
Strain : Bacillus thuringiensis BMB171
Genome accession: NC_014171
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3980639 - 3981529 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
GTGGAAGATCAGTTAAAAGATTTTATTCATTATATGGTTGTCGAAAAAGGATTAGCAAAGAATACAGTAGTATCTTATGA
ACGGGATTTAAAAAGCTACGTAAAGTATTTGCAAAATGTGGAACAGACGAAAACTTTTCATGAAGTGACCCGTTTACACA
TTGTTAACTTTTTGCAGTATTTAAAAGAGAACGGAAAATCTTCGAAAACATTGGCGCGTCATATCGCATCAATTCGTTCG
TTCCACCAATTTTTACTTCGTGAACGAGCGGTAGAACATGATCCATCCGTACATATTGAAACGCCACAAGGGGAACGGAA
ATTACCAAAGGTATTATCAGTTGATGAAGTAGAGGCGTTACTTCAAACACCAAAAATGACAAGTGCTTTTGGTATTCGTG
ATAAGGCGATGCTAGAGTTACTGTATGCGACAGGACTTCGTGTTTCAGAATTGATTGCACTCAATTTAGAAGATGTACAT
TTAACGATGGGATTTGTTCGTTGCATAGGGAAAGGGAATAAAGAAAGAATTATTCCACTAGGAAGTTTAGCAACGGAAGC
GATTCAAAAGTATATTGAAAAAGGAAGAAGAGAATTAATGGGGAAAAAAGTAGTAGATGCACTCTTTTTAAACCATCATG
GTAATCGATTATCAAGACAAGGATTTTGGAAAATATTAAAACGATTAGCGAAAGAGGCAAATATTGAAAAAGAACTTACA
CCTCATACGTTGCGTCACTCGTTTGCTACGCACTTATTAGAAAATGGAGCAGATTTACGTGCTGTACAAGAAATGCTTGG
ACATGCAGATATTTCAACTACGCAAATCTATACGCACGTTTCAAAAACTAGATTAAAAGATGTATATAAACAGTTTCATC
CGAGAGCATAG

Protein sequence :
MEDQLKDFIHYMVVEKGLAKNTVVSYERDLKSYVKYLQNVEQTKTFHEVTRLHIVNFLQYLKENGKSSKTLARHIASIRS
FHQFLLRERAVEHDPSVHIETPQGERKLPKVLSVDEVEALLQTPKMTSAFGIRDKAMLELLYATGLRVSELIALNLEDVH
LTMGFVRCIGKGNKERIIPLGSLATEAIQKYIEKGRRELMGKKVVDALFLNHHGNRLSRQGFWKILKRLAKEANIEKELT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVSKTRLKDVYKQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-57 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-57 44