|
Name : BMB171_C0078 (BMB171_C0078) Accession : YP_003662616.1 Strain : Bacillus thuringiensis BMB171 Genome accession: NC_014171 Putative virulence/resistance : Virulence Product : genetic competence negative regulator ClpC/MecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 96546 - 98981 bp Length : 2436 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG GATTGAGCCCGGAAAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTAAGCCTCAACAAAG CAAGACAACAAGTATTACAACTTCTTGGAAGTAACGAAGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCCAAT ACACCGACACTAGACAGTTTAGCACGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAGCCTGGTGTAG GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACATTAATCGGTGCAGGTGGAGCAGAAGGTG CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA ATCGACTCAAATCTTGAAAGGGTTACGCGATCGTTATGAGGCGCATCACCGTGTGTCTATTACAGATGATGCAATTGATG CAGCTGTAAAACTTTCAGATCGTTATATTACGGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT TCAAAAGTTCGCTTGCGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTCGAAAAGA AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT TGGAAGATACAAAGCGTCAGTGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT TCATGATCGTGTCATTGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGACTAAAAG ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCATTGGCA GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCTTATTCAG TTGTCCTATTAGATGAAGTAGAGAAGGCACATCCTGATGTATTTAATATTCTACTACAGGTATTGGAAGATGGTCGTTTA ACTGATTCTAAAGGACGTACAGTTGATTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCTGAGGCGTTAAA ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCACTTAACAGAAGG AGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGTCAAAAAGTTATCTTTGATGTAGAAGGGGAA ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA Protein sequence : MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI QEIVTLMVNQLVNRLKEQEIELHLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE TFVIHSAEKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BMB171_C0078 | YP_003662616.1 | genetic competence negative regulator ClpC/MecB | VFG0079 | Protein | 0.0 | 78 |
| BMB171_C0078 | YP_003662616.1 | genetic competence negative regulator ClpC/MecB | VFG0080 | Protein | 3e-148 | 52 |
