Gene Information

Name : XNC1_p0083 (XNC1_p0083)
Accession : YP_003662366.1
Strain :
Genome accession: NC_014170
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 70958 - 73936 bp
Length : 2979 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGTTAATTTCCTGTCAGAAGAGCAGCGGACAAATTATGGTAATTATTCTGTTGAGCTGACAAAAGAAACACTGGC
AAGATATTTCCATCTTGATGATTTTGATCGTCTAAATATTTCAGAAAAACGAGGTGAGCATAACCGTTTAGGCTTCGCTA
TCTTGTTGTGTACTGTACGTTTTATCGGAAAGTTTCCAGAAATTTCCAAGGTTCCCGATATTATTATTGTATTTCTGGCA
CAACAATTACATACCGAAAACATAAATAATGCTATTGACCTTTATAACTCAGGAAAGCAACGTAGGCAGCATATTGATGA
AATTATAAGTATTTATGGATACACAGAGTTTACAGACTCACGAGTCGCTTTTTCTCTGACTCGCTGGTTATATTCATTAT
GCTGGACAGGAACAAATCGGCCGGGAGTTCTTTTCGAAAGATGTACCGGATGGCTACTGTCACATAAAGTATTATTACCC
GGTTATTCTCTGATTGAGCGATATATAGCCCGGTTACGAAGCAGAGTGGAAAACAGGTTGTGGCATACACTGTCATCTTG
TATTGATGAAACACAAACCCGATGCCTTCTTGAGCTTCTGTCTGTACCACCCGGAAGTCGGTATTCGTTACTTGACCAGT
TACGGACAGCGCCAACAAAAGTTAACTCATCATCACTACGCCAGGCTATTTCACGCTTACACTCTATACGCAATCTGGGC
ATTACATTGCCAGCAATAACGCCTGTTTCCGATACCCGGATAGCAGCGTTGGCTCGTTATGCCGCAACAGCCAAAATAAC
AGTTCTTCAACGCCTGCCAGAAAAAAGAAAACTGGCAACCCTTGTCGCATTTGCCTGTTGTATGGAAGCCACCGCACAGG
ATGATGTACTTGAATTACTGGAAGCATTACTCCGGGATCTCTTCAATGGTGCGGTTCAGGCAGATAAAAAGAATCGGCAA
CGTACAATTAAAGATTTGGATCGGGCAGCGGAGATATTGGCAAAAGCCTGTAAGATGCTGCTTGATGATAAACTATCAAA
CGCGGATGTTCGTGATAGCATATATAATTTGATCCCTGAGAGTGTGCTGGAGAATGCTGTAAACAATATCACTTCGCTTA
TTCGGCCGGTTAATAATGTTTATTTCAATGAGCTGGATACTAAATTCCGCACTGTCCGTCTATTTTTACCTGAATTTCTT
TCAAAGATTCATTTTGAAGGTAATGCTTCAGCCGAAGCACTAATTAATGCGCTTTACTGGATTGAGAACAATCTTAAGAA
GAAAAAAACAGATAACGATGCTCCCCGAGAAATCATTAATAAATCATGGCAACAACATGTTATAAGAAATGATGGCAGTA
TTGATTTTCATGCTTATACATTTTGTACCCTGAAAGAACTTCAGATTACGCTGAAAAAAAGAGATATTTATGTTTCTCCC
AGCTGGCGCTATGCTGATCCACGAACTGGACTTATAGCAGGAAATGAATGGGAAGCTTTACGTCCTATTATCTGCCGCTC
TTTGGGACTGTCACTAATGCCTGCTGCCACATTGACAGCAATAGAAGTAGAGCTGATTACAGCCTATCGTGACGTACTGA
ACCGGCTTCCTGAAAACCCGGCCGTCAGATTTTCCGATACAGACGAACTCATCCTGAGTCCTTTGGACGCAATGGAAGAA
ACCCCTTCACTGATTGAGTTGCGCCAGTGCGTGACTGATATGCTACCGCGCGTGGATTTATCGGAACTCATACTTGAAAT
TGATGCCCTGACGCAGTTTAGCCGTGCCTTCACCCATATATCAGAACAGAACTCCCGGGTTGCTGACCTGAATATCAGTA
TATGTGCCATGCTAATGGCTGAAGCCTGTAATACCGGACCAGAACCTTTTATTCGCAATGATATTGCAGCCCTGAAACGT
GACCGACTGGCTTGGACGGACAGTAATTATATCAGGGATGAAACCATCCGAGATGCCAATGCCATTCTGGTTTCGGCACA
GACGGATATTTCATTGTCGGGTCTTTGGGGAGGGGGTGAAGTTGCGTCAGCGGATGGCATGAGATTCGTTGTTCCTGTTC
GTACTGTTCATGCCGGACCTAACCCTAAATATTTCGGTAAAGGACGTGGCGTGACTTGGTACAATCTAATATCTGACCAA
TATTCTGGGTTAAACGACATTGTTGTTCCGGGGACACTCAGGGATAGTTTGGTCATTCTGGCTGTCGTACTGGAGCAACA
AACGGAACAAATGCCGTTTCAAATCATGACTGATACGGGAGCCTACAGTGATATTATTTTCGGACTTTTTCGTTTGCTGG
GGTATAGATTCTGCCCACGATTAGCCGATACAGGTGGAGCCAGATTCTGGCGCATTGATCCTAAAGCGGATTATGGTCCA
TTTAATCCCATCTCCTCACATCGCCTGAATTTTGAGAAAAAAGTCGTACCGCACTGGGATGATATTCTGCGACTGATAGT
CTCACTCAAACTGGGACGTCTGAATATCCTGTCGATCATGAAAACCTTGCAAATTGGCGATAGACCAACCAGCCTAGCTC
AGGCTATAGCGGAAATCGGTCGTGCAGATAAAACCATCCACATGCTGACCTACCTTGATGATGAAACCAAACGGCGTAAA
ACATTGCAGCAGCTTAATCGTGGAGAAGGACGACACGCGGTAGCCAGAAATGTGTTTCATGGAAAACGAGGTGAACTGAG
ACAGGCATATCGCGAAGGCCAGGAAGATCAGTTGGGTTCATTAGGTTTAGTGTTAAATATGATCGTCCTGTGGAATACGA
TTTACATGGACGCCGCAGTGCAACAACTCAGGCGAGAAGGATACCCGGTGCATGACGAAGATGTAAAGAGGTTGTCTCCA
TTGCTATGCGGGCATATTAACATGCAGGGACGCTACACCTTTACGGTTCCGGAAACTGTCAGCAGAGGTGAATTGAGACC
ATTCAATGAAGATATCTAA

Protein sequence :
MPVNFLSEEQRTNYGNYSVELTKETLARYFHLDDFDRLNISEKRGEHNRLGFAILLCTVRFIGKFPEISKVPDIIIVFLA
QQLHTENINNAIDLYNSGKQRRQHIDEIISIYGYTEFTDSRVAFSLTRWLYSLCWTGTNRPGVLFERCTGWLLSHKVLLP
GYSLIERYIARLRSRVENRLWHTLSSCIDETQTRCLLELLSVPPGSRYSLLDQLRTAPTKVNSSSLRQAISRLHSIRNLG
ITLPAITPVSDTRIAALARYAATAKITVLQRLPEKRKLATLVAFACCMEATAQDDVLELLEALLRDLFNGAVQADKKNRQ
RTIKDLDRAAEILAKACKMLLDDKLSNADVRDSIYNLIPESVLENAVNNITSLIRPVNNVYFNELDTKFRTVRLFLPEFL
SKIHFEGNASAEALINALYWIENNLKKKKTDNDAPREIINKSWQQHVIRNDGSIDFHAYTFCTLKELQITLKKRDIYVSP
SWRYADPRTGLIAGNEWEALRPIICRSLGLSLMPAATLTAIEVELITAYRDVLNRLPENPAVRFSDTDELILSPLDAMEE
TPSLIELRQCVTDMLPRVDLSELILEIDALTQFSRAFTHISEQNSRVADLNISICAMLMAEACNTGPEPFIRNDIAALKR
DRLAWTDSNYIRDETIRDANAILVSAQTDISLSGLWGGGEVASADGMRFVVPVRTVHAGPNPKYFGKGRGVTWYNLISDQ
YSGLNDIVVPGTLRDSLVILAVVLEQQTEQMPFQIMTDTGAYSDIIFGLFRLLGYRFCPRLADTGGARFWRIDPKADYGP
FNPISSHRLNFEKKVVPHWDDILRLIVSLKLGRLNILSIMKTLQIGDRPTSLAQAIAEIGRADKTIHMLTYLDDETKRRK
TLQQLNRGEGRHAVARNVFHGKRGELRQAYREGQEDQLGSLGLVLNMIVLWNTIYMDAAVQQLRREGYPVHDEDVKRLSP
LLCGHINMQGRYTFTVPETVSRGELRPFNEDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACF06166.1 transposase Not tested Tn5036-like Protein 0.0 47
tnpA ACN81014.1 transposase Not tested AbaR5 Protein 0.0 45
tnpA AFV53105.1 transposase Not tested AbGRI2-1 Protein 0.0 45
ABTW07_3870 YP_005797118.1 transposase IS26 Not tested AbaR4e Protein 0.0 45
1_314 CAJ77075.1 Transposase Not tested AbaR1 Protein 0.0 45
IS15 CAJ77073.1 Insertion sequence Not tested AbaR1 Protein 1e-178 44