Gene Information

Name : XNC1_p0103 (XNC1_p0103)
Accession : YP_003662384.1
Strain :
Genome accession: NC_014170
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 91881 - 94466 bp
Length : 2586 bp
Strand : -
Note : -

DNA sequence :
TTGGAGGATTTAGCCTGGCAAACAGATAAGGGAAGTGTTCTGGCTACCGCCTTAGTGGGCAATCTACGCCGAAAGCATAT
ACTCCTTCCTGCGCCCGGTGTCATTGAACGTATCTGCGCTGAAGCACTCACCCGCGCTAACCGGCGCATCTATGATACAT
TGACTGAACCTCTGTCAGATGCGCATAACCGCAGTCTCGACAAGCTGCTTAAGCGTTGTGAAAACAGCAATATGACCTGG
CTGGCTTGGTTGCGCCAATCTCCGACGAAACCCAATTCCCGGCATATACTGGAGCATATCGAACGCCTCAAAGTATGGCA
GGCGCTTAAACTGCCTCCCGGTATTGAATTGACGGTTCATCAAAACCGGCTACTTAAACTTGCCCGCGAGGGAGCCCAGA
TGCGGCCTGCCGATCTGGCGAAATTCGAACCACGGCGTCGCTATGCCACCCTGGTAGCACTGACCCTTGAGGGGATAGCC
ACCGTGACTGATGAGATCATCGATCTGCATGATCGTATTTTGGGTAAAATGTTCAATAATGCCAGGAAAAAGCATCAACA
ACAGTTCCAGGCTTCCGGTAAAGCCATTAATGCCAAGGTACGTCTGCTCGGGCAAATTGGTCAAGTACTGCTTGACGCCA
GGCAAACCGGCAGCGACCCGTTCGCCGCCATTGAAACCGTTATATCCTGGGATTCTTTTGCTGAAAGTGTCACCGAAGCA
CAGAAGCTTACACAACCCGGGGATTTCGACTTTCTGTATCGAATGGGAGAGGGTTTTACCCTGTTACGCCGCTATACCCC
AGAATTTCTCAACATCCTTAAATTACGCGCCGCTCCGGCCGCTAAACATGTCCTCGATGCCATTGACGTGTTACGCAACA
TGAACCGCAACAATGCCCGTAAGGTGCCCGCTGACGCGACAATTGAATTTATTAAACCCCGTTGGAAAAAATTAGTGGTG
ACCGACACAGGCCTCGATCGCCGTTACTATGAACTGTGTGCACTTTCAGAACTGAAAAACACTTTGCGCTCCGGTGATAT
CTGGGTACAGGGTTCCCGTCAGTTCAAAGATTTCGAGGACTATCTGGTGCCACCTGATAAATTTGCCCGTCTCAGGCAGG
CCAGTGAATTGCCGCTGGCAGTGGCCACCGATTGCGGGCAGTATTTACAGGATCGGCTAACACAATTGGAAGCACAACTT
GCTACTGTCAACCGGATGGCACAGGTTAATGAACTGCCGGATGCCGGTATTACCGAATCAGGCTTAAAGATAACGCCGCT
TGATACAGTGGTTCCCGAGTCAGCGCAGACACTGATCGACCAGACAGCGGCATTGCTGCCGCATGTTAAGATCACCGAAC
TGCTGTTGGAAGTTGATCAATGGACAGATTTCACCCGGCACTTTACTCATCTGAAATCAGGTGACCTTGCCAGGGATAAA
ACGCTGTTGCTGACCACTATCTTGGCCGATGCCATTAACCTGGGGCTGACTAAAATGACAGAATGCTGCCCCGGGACGAC
CTACGCGAAGCTGGCCTGGCTGCAAGCCTGGCATATTCGCGACGAAACCTACTCAATGGCACTGGCCGAACTGGTCAATG
CTCAGTTACGGCATCCTTTTGCTGAGCATTGGGGAGATGGCACGACATCCTCGTCAGACGGTCAGAATTTCCGGGCGGGC
AGCAAAGCAGAGAGTACGGGGCACATCAATCCCAAATACGGTAGCAGCCCAGGACGCATGTTTTACACCCATATCTCCGA
TCAGGATGCGCCATTTCATACCAAAGTCATTAACGTCGGTCTGCGGGATTCAACTTACGTACTGGATGGCCTGCTATATC
ATGAATCTGACCTGCGTATTGAGGAACACTACACTGATACAGCGGGTTTTACAGATCACGTGTTTGCCTTGATGCACCTT
CTGGGATTTCGTTTTGCCCCGCGCATCCGCGATTTGAAAGACACCAGGCTCTATATTCCGAAAAGCGATACCCCTTATGA
GACACTGAAGCCAATGATTGGCGGTACACTTAACATCAGGCATGTCTATGCACATTGGGATGAAATTTTGCGGCTGGCGA
CCTCGATCAAGCAAGGTACAGTGACAGCTTCACTCATGCTGAGAAAGCTAAGCAGTTACCCCCGTCAGAATGGGCTGGCT
GTGGCATTGCGCGAATTGGGCCGAATTGAACGAACCCTGTTCATTCTGGACTGGTTGCAGAGTACTGAATTGCGCCGTCG
TGTTCAGGCGGGGCTGAAGAAGGGTGAAGCCCGTAATGCGCTGGCGCGGGCTGTGTTTTTCAATCGTCTTGGGGAAATTC
GTGACAGAAATTTTGAGCAGCAACGCTATCGCGCCAGTGGCTTGAATCTTGTGACAGCAGCAATAGTGTTATGGAACACG
GTTTACCTGGAACGGGCAGTAAAGAGTCTACGGGAGCATGGATACGGTATTGATGAATCACTACTTGAGTACCTGTCTCC
ACTCGGTTGGGAGCACATTAATTTAACCGGGGATTATGTGTGGGGCAGTCGTACCAGAATTGGAAATGGAAAATTCAGGC
CGTTGCGGCAACTCAAATTGGCTTAA

Protein sequence :
MEDLAWQTDKGSVLATALVGNLRRKHILLPAPGVIERICAEALTRANRRIYDTLTEPLSDAHNRSLDKLLKRCENSNMTW
LAWLRQSPTKPNSRHILEHIERLKVWQALKLPPGIELTVHQNRLLKLAREGAQMRPADLAKFEPRRRYATLVALTLEGIA
TVTDEIIDLHDRILGKMFNNARKKHQQQFQASGKAINAKVRLLGQIGQVLLDARQTGSDPFAAIETVISWDSFAESVTEA
QKLTQPGDFDFLYRMGEGFTLLRRYTPEFLNILKLRAAPAAKHVLDAIDVLRNMNRNNARKVPADATIEFIKPRWKKLVV
TDTGLDRRYYELCALSELKNTLRSGDIWVQGSRQFKDFEDYLVPPDKFARLRQASELPLAVATDCGQYLQDRLTQLEAQL
ATVNRMAQVNELPDAGITESGLKITPLDTVVPESAQTLIDQTAALLPHVKITELLLEVDQWTDFTRHFTHLKSGDLARDK
TLLLTTILADAINLGLTKMTECCPGTTYAKLAWLQAWHIRDETYSMALAELVNAQLRHPFAEHWGDGTTSSSDGQNFRAG
SKAESTGHINPKYGSSPGRMFYTHISDQDAPFHTKVINVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHL
LGFRFAPRIRDLKDTRLYIPKSDTPYETLKPMIGGTLNIRHVYAHWDEILRLATSIKQGTVTASLMLRKLSSYPRQNGLA
VALRELGRIERTLFILDWLQSTELRRRVQAGLKKGEARNALARAVFFNRLGEIRDRNFEQQRYRASGLNLVTAAIVLWNT
VYLERAVKSLREHGYGIDESLLEYLSPLGWEHINLTGDYVWGSRTRIGNGKFRPLRQLKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 83
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 81
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 79
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 72
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_p0103 YP_003662384.1 transposase VFG1031 Protein 0.0 81