Gene Information

Name : BLJ_0930 (BLJ_0930)
Accession : YP_003661225.1
Strain : Bifidobacterium longum JDM301
Genome accession: NC_014169
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1114815 - 1115597 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGAGTCGACGGACGCCGCGGCGTGCGGACGCAGGGGCGGGCGGACCGTGAGCAAGTCCACCCCGGACGAGGTCAT
GGAGCTCGCATGCGGGCTGCCGTTGACCAGGAGCGTGTTGCGTTCCGTGGTCGCGGACGCCACGCCCGGCCAGCTCGGCG
TGCTGGCCGACCTGTTCAGGGCCGAGAACGCCAGCCGGACGGAATCCAGGCGCGCCAGGCTGATCAGGAACGCGGGATTC
CCGTGCGTCAAGGGCTTCGACGGATACGACTGGGGCATGGCGTCGTTCCCCGCCGACTGGGGGCGCGAGCAGCTCATGGA
CCTCGGTTTCGTGGACCGGGCCGAGGACCTCGTGCTCTACGGCGACGTTGGATGCGGCAAGACGCACATGGCGATCGCCA
CGGGCATGCTGGCGTGCGAGAGGGGCATGCCGGTGAGGTTCTTCACCGCGTCGTCGCTGGTGATGCGTTTGCGGCGGGCG
AGGGACGAGAACCGGCTCGACGCGGAACTGCGCGCGATAGGCCGCGCCAGGCTGCTGGTCATCGACGAGCTGGGCTACCT
GCCAATCGACATCGACGGGGCTAGGCTCCTGTTCCAGGTCGTCGCGGATTCCTACGAGAAGCGGAGCGTGGTGTTCACCA
CGAACCTGGAGTTCGGACGGTGGGGCGAGGTGTTCGGCGACGGCGACATGGCCGCCGCAGTCATCGACCGCATCGTGCAC
CACGGAAGGATCGTCAGGTTCCGTGGCGAGTCGTACCGCAACAGCCACTCCCTGATGAGATAA

Protein sequence :
MSESTDAAACGRRGGRTVSKSTPDEVMELACGLPLTRSVLRSVVADATPGQLGVLADLFRAENASRTESRRARLIRNAGF
PCVKGFDGYDWGMASFPADWGREQLMDLGFVDRAEDLVLYGDVGCGKTHMAIATGMLACERGMPVRFFTASSLVMRLRRA
RDENRLDAELRAIGRARLLVIDELGYLPIDIDGARLLFQVVADSYEKRSVVFTTNLEFGRWGEVFGDGDMAAAVIDRIVH
HGRIVRFRGESYRNSHSLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-37 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-41 42
unnamed CAA21402.1 - Not tested HPI Protein 5e-41 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-41 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-41 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-41 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 9e-41 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-41 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-41 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-41 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-41 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-41 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLJ_0930 YP_003661225.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-37 43
BLJ_0930 YP_003661225.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-41 42
BLJ_0930 YP_003661225.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-41 42
BLJ_0930 YP_003661225.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 5e-41 42
BLJ_0930 YP_003661225.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-41 42