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Name : BLJ_1989 (BLJ_1989) Accession : YP_003662235.1 Strain : Bifidobacterium longum JDM301 Genome accession: NC_014169 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2403428 - 2405251 bp Length : 1824 bp Strand : - Note : - DNA sequence : ATGATGACTACTTTCAACCGCGCAATAATCCCCGACGCCATCCGCACCAACGGCGCCACCCCCAATCCGTGGTGGTCCAA CGCGGTGGTCTATCAGATTTACCCGCGCTCTTTCCAAGACACGAACGGCGATGGATTCGGCGATCTTAAGGGCATCACGT CGCGTCTTGATTACTTAGCTGATCTTGGCGTGGATGTGCTGTGGCTATCCCCGGTCTATAAGTCTCCGCAAGACGACAAC GGCTATGACATTTCCGACTATCAGGACATTGATCCTCTGTTCGGCACGCTCGACGATATGGACGAGCTGCTGGCCGAGGC CCACAAGCGTGGGCTCAAGATCGTGATGGATCTTGTTGTCAATCACACTTCCGATGAACACGCCTGGTTTGAAGCATCCA AGAACAAAGACGACGAACACGCCGACTGGTATTGGTGGCGTCCGGCTCGTCCCGGCACCACGCCCGGCGAGCCCGGCGCC GAGCCCAATCAGTGGGGCTCCTACTTTGGCGGCTCCGCATGGGAATACTGCCCCGAGCGTGGCGAATACTTCCTGCATCA GTTCTCGAAGAAGCAGCCGGACCTCAACTGGGAGAACCCTGCCGTGCGCCGCGCTGTGTACGACATGATGAACTGGTGGC TTGACCGAGGCGTCGACGGCTTCCGCATGGACGTCATCACCCTGATCTCCAAGCGCACCGATTCGAACGGCAAGCTGCCG GGCGAGTACGGCTCGGAGCTTGAGGATCTTCCTGTGGGCGAGGAGGGCTATTCCAACCCGAATCCGTTCTGTGCGGACGG CCCCCGTCAGGATGAATTCCTGGCTGAAATGCGACGTGAGGTATTCGAGGGGCGTGAAGGCTTCCTGACTGTGGGCGAGG CGCCAGGCGTCACGGCTCAGCGTAACGAGCACATCACTGATCCGGGCAACGGTGAATTGGACATGCTCTTCCTGTTCGAG CATGTTGATTTTGATTGCGAAGGTACCAAGTGGAAGCCGCTGCCGCTTGACCTGCCGAAATTCAAGAGCATTATGGCCGG TTACCAGACTGCCGTGCAGAACGCAGGATGGGCCAGCTTGTTCACCGGCAATCATGATCAGCCGCGCGTGGTCTCCCGCT GGGGCGACGACTCCGCGGAGGAATCCCGCGTCCGTTCGGCCAAGGCACTTGGCCTGATGCTGCACATGCACCGCGGCACC CCGTACATCTATCAGGGTGAGGAACTGGGCATGACCGACGCCCACTTCACGCGTCTCGACCAGTACCGTGACCTTGAATC CTTGAATGCCTACCGGCAGAGGGTCGAGGAGGCCAAGGTGCAGTCGTCTGAGTCAATGATGGCCGGTCTGGCCGCGCGCA GCCGTGACAACGCGCGTACTCCGATGCAATGGGACGGTTCCGGCTACGCCGGTTTCACCGCTCCGGACGCCGCCACTGAG CCATGGATTTCCGTGAATCCGAATCATGCCGAGATCAACGCCGCCGGTGAATTCGATGATCCGGATTCGGTGTACTCCTT CTACAAGCAACTCGTTGCGCTGCGTCACAACAGCCCGGTCGTGGCCGCCGGCGACTGGCGACTGATTGACGCCGCTGATC CGCACGTCTATGCCTTTACCCGTGAGCTCGACGCTGAGAAGTTGTTGGTCGTAGTCAATATGTCCAGTCGAACCGTTGAC CTGCCACGTGAGGCTGCCGAACTAACCGCCGTCGGAATCGCCGAGCCGAATGTGGTGATCAGCACGTATGACGCTCCGCA CACCGTGGCCTCCCTTGCCAACCGCGAGCTCGACCCGTGGGAGGCAGCCGTCATCCAGTTGTAG Protein sequence : MMTTFNRAIIPDAIRTNGATPNPWWSNAVVYQIYPRSFQDTNGDGFGDLKGITSRLDYLADLGVDVLWLSPVYKSPQDDN GYDISDYQDIDPLFGTLDDMDELLAEAHKRGLKIVMDLVVNHTSDEHAWFEASKNKDDEHADWYWWRPARPGTTPGEPGA EPNQWGSYFGGSAWEYCPERGEYFLHQFSKKQPDLNWENPAVRRAVYDMMNWWLDRGVDGFRMDVITLISKRTDSNGKLP GEYGSELEDLPVGEEGYSNPNPFCADGPRQDEFLAEMRREVFEGREGFLTVGEAPGVTAQRNEHITDPGNGELDMLFLFE HVDFDCEGTKWKPLPLDLPKFKSIMAGYQTAVQNAGWASLFTGNHDQPRVVSRWGDDSAEESRVRSAKALGLMLHMHRGT PYIYQGEELGMTDAHFTRLDQYRDLESLNAYRQRVEEAKVQSSESMMAGLAARSRDNARTPMQWDGSGYAGFTAPDAATE PWISVNPNHAEINAAGEFDDPDSVYSFYKQLVALRHNSPVVAAGDWRLIDAADPHVYAFTRELDAEKLLVVVNMSSRTVD LPREAAELTAVGIAEPNVVISTYDAPHTVASLANRELDPWEAAVIQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-112 | 44 |
