Gene Information

Name : BLJ_1244 (BLJ_1244)
Accession : YP_003661525.1
Strain : Bifidobacterium longum JDM301
Genome accession: NC_014169
Putative virulence/resistance : Unknown
Product : integrase core domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1455346 - 1456644 bp
Length : 1299 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACGAAGCGGCAGGTCACCCTCAGGTTCAGGGACGAGTACGTGAGGGCGTCGAAGAAGCAGAAGGGCGTCATCCT
GGACAGGATGTGCGAGACACTGGGGATAGGCAGGAGCACGGCCAGGCGCCTGCTCGCCCAGGCCGGGCAGCATGGGAACG
GCGCGGTGCCGGCGGCGCGGGAGCGGCCGTGCCGGTATTCGGACCAGTCGCGACAGCTGCTGGTACGGGTGTGGGTGTTG
ATGGATATGCCGTGTGGCAAGTATTTGAAGGCGATGCTGCCGCAGTGGCTGCCCGTGTTGCGCGATTGCGGGGAGCTGGA
CGCCTATGACGGGTTCACGTTCAGCGAGCTCATGGCGATGAGCGCTTCCACAATTGACCGGTACCTCAAGCCCCTGCGTG
ACGCCGCCCGCCCCAAGGGTTTGGCGGCTACGCGTCCGGCCGGCGAGCTGTTGCGCAACTCGATCACGATCAGGAAAGCC
AGCGACGAGCTGGACGGCCTGCCCGGCAACGTGGAGGCCGACACCGTCGCCCACTGCGGCCCCAGCCTCAAGGGCGAGTT
CTGCCGCACCTTGACCGTGGTCGACTTCGCCACCGGATGGACCGAGAACGCGTCCGCCCGCAACAACGCGTACCGCAACC
TCTCCCAGGCCGAGGCCATGATCGAGCAGCGGCCCCCGTTCACGATCCGCTCCTACGACAACGACAACGGCAGCGAGTTC
ATCAACACGGACTTCATCACCCACCTCCAACAGCTCGACATCCAGCAGACCAGAAGCCGCCCCTACAGGAAGAACGACCA
GGCCACCGTCGAATCCCGCAACAACCACGTCGTACGCAAACACGCGTTCTACTACCGGTACGAACTCGCCGAACTCGACC
TGTTGAACGAGCTGTGGCAGCTCGTGAGCGTCAAGGTCAACCTGTTCACCCCGTCCAAGAAACCCGTGGGACGCTCCAGC
ACCCGCGACGGACGACCCCGGCGCGTCTACGACCAGCCCACGACCCCATGGGAGAGACTCAAACGATTCGACGAGCAGGA
CCGGGCCGACGGCGGCACCGGGTTCATCCTGCCCGAGCGACGCGACCAGATCGAACGTCTGATCGCCGAGACAAACCCGG
CCGAGCTCGTCCGCCGCATCCACGCCATCCAGGACCAGCTCGAGGACATGGCCGCTCCACGAACCCGACGCCTCGAGAAA
CGCGTCGGCCCCGACATGGCATACTTGGACAGGACACTCGCCAAGATCGCGGGCGTCCGACCGGAAGACCACAACGAAAC
ACCAGCCGACACCGACTAG

Protein sequence :
MATKRQVTLRFRDEYVRASKKQKGVILDRMCETLGIGRSTARRLLAQAGQHGNGAVPAARERPCRYSDQSRQLLVRVWVL
MDMPCGKYLKAMLPQWLPVLRDCGELDAYDGFTFSELMAMSASTIDRYLKPLRDAARPKGLAATRPAGELLRNSITIRKA
SDELDGLPGNVEADTVAHCGPSLKGEFCRTLTVVDFATGWTENASARNNAYRNLSQAEAMIEQRPPFTIRSYDNDNGSEF
INTDFITHLQQLDIQQTRSRPYRKNDQATVESRNNHVVRKHAFYYRYELAELDLLNELWQLVSVKVNLFTPSKKPVGRSS
TRDGRPRRVYDQPTTPWERLKRFDEQDRADGGTGFILPERRDQIERLIAETNPAELVRRIHAIQDQLEDMAAPRTRRLEK
RVGPDMAYLDRTLAKIAGVRPEDHNETPADTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0909 YP_005160001.1 integrase catalytic subunit Not tested Not named Protein 3e-63 46
CDBH8_0921 YP_005160013.1 integrase catalytic subunit Not tested Not named Protein 1e-67 45