Gene Information

Name : BLJ_1080 (BLJ_1080)
Accession : YP_003661367.1
Strain : Bifidobacterium longum JDM301
Genome accession: NC_014169
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1272325 - 1273086 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACATCGAGTTTGCCCCCGCTGGCCCAGAGCATGGGGCATTGCTGACGTTGGAGCATGTGACGAAGGCGTTTCC
AGGCAAGGACGGGAGCGTGCTGGAGATATTGCATGATACGTCACTGGCCATCGATCGCAGCGAGCTCGTGGCCATCGTCG
GGCCGTCCGGCTCGGGCAAAAGCACGCTGCTGTCGTTACTGGGCACGCTGGACATGCCGACCTCGGGAATATTGCGATAC
GACGGCGGGGATGTGAATGCGATGGGTGAGCGGCAGCGCAGCGTCCTGCGGGCCGCGCGCATCGGCTTCGTGTTCCAGCA
GTTCCATCTGATCGCCACCGTATCCGCCTTGGAGAACGTGATGACAGGCCTGCAATACACAACCCTGCCGCGCGGCGAAC
GTCGGCAACGGGCCGCCGAGGCGTTGGAACAGGTCGGATTGGGGAACCGCCTGCATCACCGGCCGGCCCAGTTGTCGGGC
GGCGAACAGCAGCGTGTGGCCATCGCCCGCGCCCTGGCCAAACGGCCGGACATCATCTTCGCCGACGAGCCGACCGGCGC
GCTGGACTGCGAAACCGGCCACACCATCGTCGACCTGCTGCTCACGGCGGCCGATTCCGGCGCAAGCCTGGTCATGGTCA
CCCACGACCAGACCATCGCCGCACGTTTCCCCAGGCGTCTGCACATCCAAGACGGCCTAGTCACCGAACTCGACAAGCCG
AATCAAGCCCCCTCTGACGAGGGGCTGTCAGCCAAAGGCTGA

Protein sequence :
MNDIEFAPAGPEHGALLTLEHVTKAFPGKDGSVLEILHDTSLAIDRSELVAIVGPSGSGKSTLLSLLGTLDMPTSGILRY
DGGDVNAMGERQRSVLRAARIGFVFQQFHLIATVSALENVMTGLQYTTLPRGERRQRAAEALEQVGLGNRLHHRPAQLSG
GEQQRVAIARALAKRPDIIFADEPTGALDCETGHTIVDLLLTAADSGASLVMVTHDQTIAARFPRRLHIQDGLVTELDKP
NQAPSDEGLSAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLJ_1080 YP_003661367.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-37 46
BLJ_1080 YP_003661367.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-34 44
BLJ_1080 YP_003661367.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-23 41
BLJ_1080 YP_003661367.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-28 41