Gene Information

Name : Srot_0682 (Srot_0682)
Accession : YP_003657995.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 667016 - 668431 bp
Length : 1416 bp
Strand : +
Note : KEGG: mav:MAV_1509 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein

DNA sequence :
ATGGGGAATAAGCACGACGAGAACAGCGAGAAGCGGGAGATCGGCGTCGGGTTGCTCGGCCTGGGCACCGTCGGCTCGGA
AGTGGCGCGAGTGCTCGTCGAGGACGCCGAAGAGCTCGCGGCCAGGGTTGGGGCGAAACTCGTCCTGCGCGGGGTGGCCG
TGCGCAAGCTCGACGCGCCGCGAGGGGTCTGCGAACACCTCGTGGACCCGGCTTTGCTGACCACTGACGCCGCCGAGCTG
GTCGCCAGGGACGATGTGGACGTCGTGGTCGAGCTGATCGGCGGGATCAACCCCGCCAAAGATCTCATCCGCCAGGCGCT
GCGCGCGGGCAAGTCGGTGGTCTCCGCGAACAAGGCATTGTTCGCGGCCCACTCCGCGAAGTTGTTCGAGGCGGCGCAGA
AGGCCAAGGTCGATTTGTTCTTCGAGGCCGCGGTCGCGGGAGCCATCCCGGTCATCCGTCCGTTGCGCCAATCCTTGGCG
GGGGACCGGATCACCACGGTGGCCGGGATCGTCAACGGCACCACGAACTTCATCCTCTCGGCCATGGACTCCAAAGGCGA
CGATTACGACAAGGTTTTGCGCGAGGCGCAGGAGCTCGGCTACGCGGAGGCGGACCCCACTGCGGACGTGGGCGGCCACG
ACGCCGCCGCGAAAACGGCGATCATGGCTTCCATCGCCTTCCACACCCGCGTCACCGCAGACGATGTGCACGTCGAAGGC
ATCACGGACATCGCCGCTGCCGACGTCGAATCGGCGAAGCAGCTCGGCTACACGATCAAGTTGCTCTCCATGTCCGAGCG
GGTGACTGGCGGCGACGGGCACGAGCGCGTCTCCGCCAGGGTGTACCCGGCGCTGGTGCCGCGCTCGCATCCCCTCGCGA
GCGTCAACGGCGCGTACAACGCGGTCGTCGTGGAGGCGGTGAACGCGGGCAGGCTGATGTTTTACGGCCAAGGGGCTGGC
GGGGCTCCCACCGCTTCTTCTGTCGCGGGCGACCTCGTCGCCGCCGCCCGGAACCTGGTGCTCGGGCGCGCGGTGGCCAG
CGAGTCCACGTACGCGAAGCTGCCGATCGCCCCGATCAGCGATGTGGCCGCGCGGTATTTCGTGCGCATACGGGTGGACG
ACCGCCCCGGTGTGCTCGCCTCGGTCGCGGCCGTGTTCGCCAAACGGGACGTCAGCATCGCGACGGTCCTGCAGAAGGGC
CTTCCTCGTGACGGCGGGCATGACGCTTCGGGAGGCTCTGACGCGTCTGCGCAGTCCGAGTCCGCCGCGGACGGGGCTTC
GGGCGGAGCGGAGATCATCATCATCACCCACTCCGCGCTCGGCGGGGCGCTCTCCGAGACCGTGCGCGAGGTCGAGGGGC
ATCCAGCTGTGGTCGAGGTGGAAAGCGTCTTGCGATTGGAGTTCGAGAATGACTGA

Protein sequence :
MGNKHDENSEKREIGVGLLGLGTVGSEVARVLVEDAEELAARVGAKLVLRGVAVRKLDAPRGVCEHLVDPALLTTDAAEL
VARDDVDVVVELIGGINPAKDLIRQALRAGKSVVSANKALFAAHSAKLFEAAQKAKVDLFFEAAVAGAIPVIRPLRQSLA
GDRITTVAGIVNGTTNFILSAMDSKGDDYDKVLREAQELGYAEADPTADVGGHDAAAKTAIMASIAFHTRVTADDVHVEG
ITDIAAADVESAKQLGYTIKLLSMSERVTGGDGHERVSARVYPALVPRSHPLASVNGAYNAVVVEAVNAGRLMFYGQGAG
GAPTASSVAGDLVAAARNLVLGRAVASESTYAKLPIAPISDVAARYFVRIRVDDRPGVLASVAAVFAKRDVSIATVLQKG
LPRDGGHDASGGSDASAQSESAADGASGGAEIIIITHSALGGALSETVREVEGHPAVVEVESVLRLEFEND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 5e-53 41
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 5e-53 41