|
Name : Srot_0467 (Srot_0467) Accession : YP_003657785.1 Strain : Segniliparus rotundus DSM 44985 Genome accession: NC_014168 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 447287 - 449431 bp Length : 2145 bp Strand : - Note : KEGG: mab:MAB_2759 transketolase; TIGRFAM: transketolase; PFAM: transketolase; transketolase central region DNA sequence : GTGTCAGCTACTGCTCAGGACACCGCGAACGCGGCGGACCCCGCTCTCATCGCCAAGCACACCCGCGCCGCCTACCCTGC CGATTGGACCGACCTCGACACTCGCGCCGTGAACACCGTCCGGGTGCTCGCCGCGGACGCGGTCCAGAAGGTCGGCAACG GGCACCCCGGCACCGCCATGAGCCTCGCCCCCCTCGCCTACACCCTGTTCCAACGGGTGCTGCGGCACGACCCGAACGAC GCCGACTGGGTCGGCAGGGACCGGTTCGTCCTGTCCTGCGGGCACGCCAGCCTCTTCCTGTACATCCAGCTCTACCTCGG CGGCTTCGGGCTCGAACTCGACGACATCGAGCAGCTGCGCGTGTTCGGCTCGCTCACCCCCGGCCACCCCGAGTACCGCC ACACCAAAGGCGTGGAGATCACCACCGGACCGCTCGGGCAAGGCCTCGCCCACGCTGTCGGCATGGCCTACGCCGCCCGG CGCGAGCGCGGCCTCTTCGACCCGGACGCCCCCGCCGGGCAGAGCCCCTTCGACCACCACATTTACGTCGTGGCCTCGGA CGGCGACCTGCAAGAAGGCGTGACCAGCGAAGCGTCTTCGTTGGCGGGTACGCAGCAGCTGGGCAACCTCGTCGTCGTCT ACGACCGCAACCACATCTCCATCGAGGACAACACCGCGATCGCCTTCGACGAAGACGTCGCCAAGCGCTACGAGGCGTAC GGCTGGCACGTCCAGCACGTCGACTCGGGCGAGGACGTCGTCGCCATCGAGGCGGCGCTGGAAGCGGCGAAGGCCGAAAC CGCGAGGCCGTCGATCATCATCCTGCGCACCATCATCGGCTACCCGGCCCCGAAGCTGCAGAACACCGGCGCGGTCCACG GCGCGGCGCTCGGCGACGAAGAGGTCGCCGCCGTCAAGGAGCAGCTCGGCTTCGACCCGGAGCAAAAGTTCCAGGTCGAC CCCGAAGTCATGCAGCGCACCCGGCGCCTGCGCGAGCGGGGCGCGAAGGCGCACCAAGCATGGGACCAGCAGTTCGAGGC CTGGGCCGCGCGCGAGCCGGAGCGCAAACAGCTCTTCGACCGGGTCTTCGCGAACCAGCTGCCCAAAGGGCTCGCCGACG CGCTGCCGAAATGGCAGGTCGGCGACAAAGACGTGGCCACCCGCAAGGCCTCCGGCGACACGCTGGAGGCGCTCGGCCCC CTGCTCCCCGAGCTCTGGGGCGGCTCGGCCGACCTCGCGGGCAGCAACAACACCACCATCAAAGGCTCCGACTCGTTCGG GCCCTCGGGCATCTCCACCGAAGCGTGGAAAGCGCAGCCGTACGGGCGGACACTGCATTTCGGCATCCGCGAGCACGCGA TGGCCGCCATCCTCGGCGGCATCACCCTGCACGGCCCCACGCGCGCCTACGGCGGAACGTTCCTCCAGTTCAGCGACTAC ATGCGCCCGGCGGTGCGGCTCGCGGCGCTCATGGAGATCGATCCGATCTACATCTGGACGCACGACTCCATCGGCCTCGG CGAGGACGGTCCGACCCACCAGCCGGTCGAGCACCTCGCCGCGCTGCGGGCCATCCCGCACCTGAACGTGGTGCGCCCCG CCGACGCGAACGAGACCGCGTTCGCGTGGCTCGCCCTGCTGGACCGCGAGCAGCTCGGCCTTTCCAAGCTGCACGGCCCG ACCGGGCTGATCCTCTCCCGCCAGAACCTGCCGATCCTGCCGGGCACGAGCGCCGAGGGCGTGGCCAAGGGCGCGTACGT CCTGCAAGAGGCTGAGGCCACCGAGCCGCAAGTGGTGCTCATCGGCACCGGCTCAGAGCTCCAGCTCGCCGTGGAGGCGC GCAAGGAGCTCGAAAGCCGGGGCGTCGGGGCGCGAGTCGTCTCCGCGCCGTGCGTGGAATGGTTCGAGGCGCAAAGCCAG CAGTACCGAGACCAGGTCCTCCCGCCCGCGGTCAAGGCGCGAGTCGCGGTGGAGGCCGGGATCGCGTTGACCTGGCACCG CCACGTCGGGGACGCGGGCGAGATCGTCTCCATCGAGCACTACGGGGCCTCGGGGGACTGGAAGACATTGTTCCGCGAGT TCGGATTCACCTCGCAAGCCGTGGTGGACGCCGCAACGCGGTCTCTCGAAAAAGCCAAAAGCTGA Protein sequence : MSATAQDTANAADPALIAKHTRAAYPADWTDLDTRAVNTVRVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRVLRHDPND ADWVGRDRFVLSCGHASLFLYIQLYLGGFGLELDDIEQLRVFGSLTPGHPEYRHTKGVEITTGPLGQGLAHAVGMAYAAR RERGLFDPDAPAGQSPFDHHIYVVASDGDLQEGVTSEASSLAGTQQLGNLVVVYDRNHISIEDNTAIAFDEDVAKRYEAY GWHVQHVDSGEDVVAIEAALEAAKAETARPSIIILRTIIGYPAPKLQNTGAVHGAALGDEEVAAVKEQLGFDPEQKFQVD PEVMQRTRRLRERGAKAHQAWDQQFEAWAAREPERKQLFDRVFANQLPKGLADALPKWQVGDKDVATRKASGDTLEALGP LLPELWGGSADLAGSNNTTIKGSDSFGPSGISTEAWKAQPYGRTLHFGIREHAMAAILGGITLHGPTRAYGGTFLQFSDY MRPAVRLAALMEIDPIYIWTHDSIGLGEDGPTHQPVEHLAALRAIPHLNVVRPADANETAFAWLALLDREQLGLSKLHGP TGLILSRQNLPILPGTSAEGVAKGAYVLQEAEATEPQVVLIGTGSELQLAVEARKELESRGVGARVVSAPCVEWFEAQSQ QYRDQVLPPAVKARVAVEAGIALTWHRHVGDAGEIVSIEHYGASGDWKTLFREFGFTSQAVVDAATRSLEKAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-117 | 43 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-117 | 43 |
