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Name : Srot_0433 (Srot_0433) Accession : YP_003657751.1 Strain : Segniliparus rotundus DSM 44985 Genome accession: NC_014168 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 414939 - 417467 bp Length : 2529 bp Strand : + Note : KEGG: msm:MSMEG_6091 negative regulator of genetic competence ClpC/MecB; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: ATPase AAA DNA sequence : ATGTTTGAGAGATTTACCGACCGCGCACGTCGCGTTGTGGTCCTGGCCCAGGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATTCTGTTGGGCCTCATCCACGAGGGCGAAGGCGTCGCGGCGAAGTCTTTGGAGTCCTTGGGGA TCTCCTTGGAGGCCGTCCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGGCCCCTCTGTGCACATTCCCTTC ACGCCGAGGGCGAAGAAAGTGCTGGAGCTGTCCTTGCGCGAAGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGGCTGATCCGTGAGGGCGAAGGCGTCGCGGCGCAGGTCCTCGTCAAACTCGGGGCCGACCTGTCGCGGG TGCGCCAGCAAGTCATCCAGTTGCTCTCCGGCTACTCCGGCGGCGGCAAAGAGCCCGAGGCCGCCGGGGCCGGCGGCCGG GGCGGCGAGGCGGGCACCCCGTCCACCTCGCTGGTGCTCGACCAGTTCGGCCGCAACCTCACCCGCGCCGCGCTCGACGG CAAGCTCGACCCCGTCATCGGGCGCGAGAAAGAAATCGAGCGCGTCATGCAGGTGCTCTCGCGGCGGACCAAGAACAACC CGGTCCTCATCGGCGAGCCCGGCGTCGGCAAAACCGCCGTCGTGGAGGGCCTCGCGCAGGCCATCGTGCACGGCGAGGTC CCCGAGACGCTCAAAGACAAGCAGCTCTACACCCTCGACCTGGGTTCCTTGGTCGCGGGCAGCCGGTACCGGGGCGACTT CGAAGAACGGCTCAAGAAAGTCCTCAAGGAGATCAACTCCAGGGGCGACATCATCCTTTTCATCGACGAGCTGCACACTC TGGTCGGCGCGGGCGCCGCCGAGGGCGCCATCGACGCGGCCTCGATCCTCAAGCCCAAGCTGGCCCGAGGCGAGCTGCAG ACCATCGGCGCGACCACGCTCGACGAATACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCAGGTTCCAGCCGGT CCAGGTCGGGGAGCCCTCGGTGGAGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCCCACCACCGCG TGTCCATCACCGATTCGGCGCTGGCCGCCGCGGCTTCCCTCGCGGACCGCTACATCAACGACCGGTTCCTGCCGGACAAG GCCATCGACCTCATCGACGAGGCGGGCGCGCGGATGCGCATCCGCCGCATGACCGCGCCCCCCGACCTGCGCGAGTTCGA CGAGAAAATCGCGAACACCCGTCGGCAGAAAGAGTCCGCGATCGACGAGCAGGACTTCGAGAAGGCGGCTGGCCTGCGCG ACACGGAGAAGAAGCTCGTCGCGCAGCGCGCCGAACGGGAGAAGCAGTGGCGCTCCGGCGACATGGACGTCGTCGCCGAG GTGGACGAGGAAGAGATCGCGGAGGTGCTGGCCAACTGGACTGGCATCCCCGTCTTCAAACTCACCGAGGAAGAAACCGC CCGTCTGCTGCGCATGGAGGACGAGCTGCACAAACGGATCATCGGCCAGCGCGACGCCGTCGCGGCGGTCGCCAAGGCGA TCCGGCGCACCCGCGCGGGCCTGAAAGACCCCAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCCTCCGGCGTCGGG AAGACCGAGCTGTCCAAGGCGCTCGCGAACTTCCTGTTCGGCGAGGACGACGCGCTCATCCAGATCGACATGGGCGAGTT CCACGACCGCTTCACGGCCTCGCGCCTCTTCGGGGCTCCTCCGGGCTACGTCGGTTACGAAGAGGGCGGCCAGCTCACCG AGAAGGTGCGCCGCAAGCCGTTCTCCGTCGTGCTGTTCGACGAGATCGAGAAAGCGCACCACGAGATCTACAACACGCTG TTGCAGGTGCTCGAGGACGGCCGTCTCACCGACGGCCAAGGCCGCACCGTGGACTTCAAGAACACAGTGCTGATCTTCAC CTCGAACCTCGGCACCTCCGACATCTCGAAGGCAGTCGGCTTGGGCTTCAGCTCGGGCGAGGGCAACACCTCGAACTACG AGCGGATGAAGCAAAAAGTCCAGGACGAGCTCAAGAAGCACTTCCGCCCCGAGTTCTTGAACCGCATCGACGAGATCGTC GTCTTCCACCAGCTCACGAACGAGGAGATCGTGAAGATGGTGGACTTGATGATCACTCGCGTGGCCGCGGCGCTCAAGGC GAAAGACATGGAGATCGAGCTCAGCGCGCAAGCGAAAGGGCTGTTGGCCAAGCGCGGCTTCGACCCGGTGCTCGGCGCCC GTCCGCTGCGCCGGACGATTCAGCGCGAGATCGAGGACCAGCTCTCGGAGAAGATCCTCTTCGGCGAGTTCGGCGCCGGG CAGAAGGTGCTTGTGGACGTCGAAGGCTGGGACGGCGAGTCCGCGGGCGAAGACGCCAAGTTCGTCTTCCGCGCGGCCGC AGCCGCCGAGCCGGTCCTCGCAGGCGCTGGGGAGCCCGCTGGCGAATAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRSQVEEIIGQGQQGPSVHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLLSGYSGGGKEPEAAGAGGR GGEAGTPSTSLVLDQFGRNLTRAALDGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQ TIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYEAHHRVSITDSALAAAASLADRYINDRFLPDK AIDLIDEAGARMRIRRMTAPPDLREFDEKIANTRRQKESAIDEQDFEKAAGLRDTEKKLVAQRAEREKQWRSGDMDVVAE VDEEEIAEVLANWTGIPVFKLTEEETARLLRMEDELHKRIIGQRDAVAAVAKAIRRTRAGLKDPKRPSGSFIFAGPSGVG KTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHHEIYNTL LQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSSGEGNTSNYERMKQKVQDELKKHFRPEFLNRIDEIV VFHQLTNEEIVKMVDLMITRVAAALKAKDMEIELSAQAKGLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEFGAG QKVLVDVEGWDGESAGEDAKFVFRAAAAAEPVLAGAGEPAGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Srot_0433 | YP_003657751.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 59 |
| Srot_0433 | YP_003657751.1 | ATPase AAA | VFG0080 | Protein | 7e-142 | 51 |
