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Name : Srot_0336 (Srot_0336) Accession : YP_003657654.1 Strain : Segniliparus rotundus DSM 44985 Genome accession: NC_014168 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 315004 - 318279 bp Length : 3276 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; KEGG: rop:ROP_35510 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; nucleic acid binding OB-fold DNA sequence : ATGACAGCAGGGGCAGTCGAGGAGAAAAAAACAGGCGCCAGGGGCGAGCTGCGTCCGCCTCGGCCGGCCGCGGGCGACAA GCGCAGACGCAAAGGCCCTTTGCATCTGGTGCCGCACCGGTCCGGGATGGCCATCGCCGCGTTCTCGGTGCTCTCGTTCC TCTTCAGCGTCTCCCCACACCTGCGTCGTTGGGCGGAAACCCCCCGCGTCTACCTGGACACGTATTTTTTCGCCGTCCCC GACACCAGCTTCGCCTGGGCGTTCGTGCTGGGCATCCTCGCCGCCGCGCTCGCCGAGCGCAAACGCCTGGCCTGGCTGAC CCTGCTCGTGACCCTCGTCGTCTTCTCGTGGTACAACGTCGTCCAACTGCTGGACGGGGAACGGCTCTGGCCGATCATCG GGCTGGCAACGCACTGCGCGGCCGTCGCGCTGCTCCTGGCCGCGCACGGGGAATTCAGCACGAAGGTCCGCCGCGTCGCG CCGCTGCGCGCCCTGGTCGCCCTGTTCATCGGCCTCCTCGTCGCGACCGGGCTCGGCTGGGCGCTGGTCGAGGCGTTCCC GCACACGGTGCCCCCGGACGAGCGCCTGGCCTACACCCTCAACCGGGTCGTCATCTTCACCGCGTTCGAGAGACACGACT TCAGCGGCTACTCCTACGGCTTCGTCAACACCCTGCTCGGGCTGTTCGGCGCGTTCGCGCTCATCGCCGCGATCATCGTT CTGTTCCGCTCCCAACGGCTCGCCAGCACGCTGACTGTCGAGGAGGAACGCTCCATCCGGAGCTTGCTGTCCTTGTACGG CGAGGACGACTCGCTCGGCTACTTCGCGACGCGGCGGGACAAGTCGGCGGTCTTCGCCCCCAACGGCAAAGCTGCCCTCA CCTACCGGGTGGAGGTCGGCGTGTGCCTCGCCTCGGGCGACCCGATCGGCGAGGAGCGCTCTTGGCAGGGCGCCATCGGA GCCTGGCTCGCGACCTGCGAGAGCTACGGCTGGACGCCCGCTGTCATGGGGGCGAGCGAACGCGGCGCCATCGCGTATCG CGAGGCCGGCCTTTCCGCGCTCCAGCTCGGCGACGAGGCGATTCTGAACCCGCGCAGCTTCAGCCTCGACGGCCCCGCCC GCAAAGTGGCCCGCCAAGCGGTCACCAGGGTCCGCCGCGCCGGGATCACTGTGCGCGTGCGCCGTCACAGCCAACTGTCC GAAGAGGAGCTGGCCGCCACGGTGCGCAGAGCGGACCAGTGGCGCATCGGCGCGGAACGCGGCTTTTCCATGGCGCTGGG CAGGCTCGGCGACGGCACAGACGGGGACTGCATGCTCGTGGAGGCGCTCGGCCCGGACGGCGACGTGGTGGGGCTGCTCT CCTTGGTCCCGTGGGGCCGTTCGGGAGTCTCGCTCGACGTGATGCGACGGGACCCGAAATCCCCCAACGGCGTGATGGAC CTGATGATCTGCGAGCTCGCCCTGCATGCCAAACAGCTCGGTGTCTCGAAGATCTCGCTGAATTTCGCCGTCTTCCGCAA CGCCTTCGAAGAAGGCTCCCGACTCGGCGCGGGCCCGATGATCCGCTGGTGGCGCGGCGTGCTCCTGTTCTTCTCACGTT GGACGCAGCTGGAGGCGATGTACCGCTTCAACCACCGGTTCGGGCCGGAATGGGTTCCGCGCTACGTGTGCTTCGAAGAG GCGCGCGTGGTGCCCCGGGTCGCCATGGCTTCGGGGATCGCCGAGGGCTTTTTGGTCGTGCCGAAGTTCGGCGGCAAATC CGAGCCGAGGGGGCAGCACCCGGTCCCGCCCGAAGCCCTCCTCGCGGCCACCGCGCTGCCCGAGGAGGACAAGCAGGACC ACCCGCGCCTGCCGCAGCAGGTGCGGGTGCGGATCGGGAAACTCGAACGGCTCAAAGAACAAGGCGTGAACCCGTACCCC GAGTGCGAGCCGCCGACTTCCACCGTCCGCGACGCCTTGGCGGCGGGCCGCTCCCGCTCCGGGCGGCAGGTGCGGGTGTC CGGTCGGGTGCTGCGCGAGCGCGACCATGGCGGCGTGGTGTTCGTCGACCTCTCCGACAGCTCCGGCGCCGCGCAAGTGG TCCTTGAGGAGCGCGAGCTGCCCGACGGCAAGCTCAACGCGTTCCGCAAAGAGATCGACCTCGGGGATCTGATCAGCGTG GAGGCGGCGCCCGGTGTTTCCAGGACCGGCACCGCGTCCCTCATGGCGCGGGATTGGCGGCTCAACGCCAAATGCCTGCG CCCGTTGCCGGACAAACGCCGGGGCCTCACGGACCCGGAGGCAAAAGTGCGCCTGCGGCATGTGGAGCTGATGACGAACC CGCAGGCGCGGGACGCGCTCGCCAAGCGCGGCGCGGTGCTGCGCACACTGCGCGAGCAGCTGTGGGGCGAGGGGTTCCTG GAAGTCGAGACGCCGGTCCTGCAACGAGTCCACGGCGGCGCCAACGCGGAACCGTTCCGCACCCACATCAACGCGTACGA TCTGCCCCTGTACCTGCGCATCGCGCCGGAGCTGTACCTCAAACGCCTGCTCGTCGGCGGCATGGAGCGAGTCTTCGAGA TCGGCAGAGTCTTCCGGAACGAGGGCGTGGACGCGACCCACAACCCCGAATTCACCCTGTTGGAGGCGTACCAGGCGCAT TCGGACTACCGAGGCATGCGGGACTTGACCGAGCAGATGCTGCGCGCCAGCGCGCAGGCCGTCGGCCACGCGGGCCTGCT CGCCGCCCCAGGGCCGTGGCCGATGATCCCGATGCTCACCGCGGTCTCGCAGGCGCTCGGGGACGAGGTGGACGAGCACA CCCCGGCGGCGAAGTTGCGCCAGCACCTTGTCGAGCGGGGGTTCGAATGCCGCCCCGACTGGGACAGCGGGCAGCTGCTC CTGGAGCTGTACGAACGCCTGGTCGAGCATACGACGACCACGCCGACCTTCTACAGCGACTTCCCGCTGTCGGTTTCCCC GCTGACCAAACAGCACCCGGACCGCCCTGGGGTCACGCAACGGTGGGATCTGGTGGTCGGCGGCATGGAGCTCGCGACCG CCTACAGCGAACTCAACGACCCCGTCGAACAGCGCCGCCGCCTCCAGGCCCAGTCCGAAGCGGCCGCGAGCGGCGATCCG GAGGCGATGGAACTCGACGAAGACTTCCTCGCGGCGCTGGAGCACGCCATGCCGCCAAGCGGCGGGCTCGGCGTCGGCGT CGACCGTGTCGTGATGCTGCTGACCGGGCGCACTATCCGTGAGACTTTGGCGTTCCCGCTCGTCAAACCGAAATAA Protein sequence : MTAGAVEEKKTGARGELRPPRPAAGDKRRRKGPLHLVPHRSGMAIAAFSVLSFLFSVSPHLRRWAETPRVYLDTYFFAVP DTSFAWAFVLGILAAALAERKRLAWLTLLVTLVVFSWYNVVQLLDGERLWPIIGLATHCAAVALLLAAHGEFSTKVRRVA PLRALVALFIGLLVATGLGWALVEAFPHTVPPDERLAYTLNRVVIFTAFERHDFSGYSYGFVNTLLGLFGAFALIAAIIV LFRSQRLASTLTVEEERSIRSLLSLYGEDDSLGYFATRRDKSAVFAPNGKAALTYRVEVGVCLASGDPIGEERSWQGAIG AWLATCESYGWTPAVMGASERGAIAYREAGLSALQLGDEAILNPRSFSLDGPARKVARQAVTRVRRAGITVRVRRHSQLS EEELAATVRRADQWRIGAERGFSMALGRLGDGTDGDCMLVEALGPDGDVVGLLSLVPWGRSGVSLDVMRRDPKSPNGVMD LMICELALHAKQLGVSKISLNFAVFRNAFEEGSRLGAGPMIRWWRGVLLFFSRWTQLEAMYRFNHRFGPEWVPRYVCFEE ARVVPRVAMASGIAEGFLVVPKFGGKSEPRGQHPVPPEALLAATALPEEDKQDHPRLPQQVRVRIGKLERLKEQGVNPYP ECEPPTSTVRDALAAGRSRSGRQVRVSGRVLRERDHGGVVFVDLSDSSGAAQVVLEERELPDGKLNAFRKEIDLGDLISV EAAPGVSRTGTASLMARDWRLNAKCLRPLPDKRRGLTDPEAKVRLRHVELMTNPQARDALAKRGAVLRTLREQLWGEGFL EVETPVLQRVHGGANAEPFRTHINAYDLPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNEGVDATHNPEFTLLEAYQAH SDYRGMRDLTEQMLRASAQAVGHAGLLAAPGPWPMIPMLTAVSQALGDEVDEHTPAAKLRQHLVERGFECRPDWDSGQLL LELYERLVEHTTTTPTFYSDFPLSVSPLTKQHPDRPGVTQRWDLVVGGMELATAYSELNDPVEQRRRLQAQSEAAASGDP EAMELDEDFLAALEHAMPPSGGLGVGVDRVVMLLTGRTIRETLAFPLVKPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-156 | 44 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 8e-156 | 44 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-156 | 44 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-156 | 44 |
