Name : Srot_2379 (Srot_2379) Accession : YP_003659655.1 Strain : Segniliparus rotundus DSM 44985 Genome accession: NC_014168 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2406989 - 2407741 bp Length : 753 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: mav:MAV_5093 transposase DNA sequence : GTGATCCGGTTCGTGGACGCGAACCGGGAGCGGTTCGGGGTCGAGCCGGTCTGCCGGGTGCTCAAAGGGCACGGCGTGAA GATCGCCCCGCGCACCTACTGGGCCGCCAAGTCCAGGCCCGCGTCCGCCCGCTCGGTCCGCGACCAGGAGCTCAAGGCTC TGATCACGGACGTGTTCGAGGACCGGCTCAAAGGCCGGGGCCTCGCGGGGGCCAGGAAGGTCTACCACCTTCTCAAACGC GACGGGCATCAGGTCGCCCGCTGCACGGTCGAGCGGTTGATGCGCGAGCTGGGCTTGAGAGGCGCGTCGCGGGGCGACGG CAAAGTCCGCACCACCCGGCGGGACGACTCGGCTCCCAGGCCCCCGGACCTGGTCAAGCGCCAGTTCAAGTCGGAGGCCC CGAACCGTTTGTGGGTCGTGGACTTCACCTATGTCGCGACCTGGTCGGGCATGGGTTTCACGGCGTTCGCCACCGACGTC TACTCGCGGCGGGTCGGCGGTTGGAGAACGGCCTCGCGCATGCCCGTCGAGCTCCCGTTGGACGCTTTGGAGATGGCCCT GTGGGTCTGTGAGAGAGCTGGTCAGAGCCTTGACGGGCTCATCCATCACAGCGACGCGGGATCGCAATACACTGCGATCC GCTACGCCGAGCGCCTCGCCGACGCGGGCGCCCTCGCGTCCATCGGGACGGTCGGCGACTCCTACGACAACGCCCTCGCC GAATCCGAGATCGGCCTCTACAAGCGCGAATGA Protein sequence : MIRFVDANRERFGVEPVCRVLKGHGVKIAPRTYWAAKSRPASARSVRDQELKALITDVFEDRLKGRGLAGARKVYHLLKR DGHQVARCTVERLMRELGLRGASRGDGKVRTTRRDDSAPRPPDLVKRQFKSEAPNRLWVVDFTYVATWSGMGFTAFATDV YSRRVGGWRTASRMPVELPLDALEMALWVCERAGQSLDGLIHHSDAGSQYTAIRYAERLADAGALASIGTVGDSYDNALA ESEIGLYKRE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 4e-48 | 49 |
unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 4e-37 | 49 |
CDCE8392_1774 | YP_005134308.1 | transposase-like protein | Not tested | Not named | Protein | 1e-34 | 48 |
IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 4e-40 | 47 |
ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 2e-42 | 47 |
ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 1e-41 | 47 |
ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 2e-42 | 47 |
unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-42 | 47 |
Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 1e-40 | 47 |
Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 8e-41 | 47 |
APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 2e-41 | 47 |
IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-40 | 47 |
c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-41 | 47 |
IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-40 | 47 |
c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-42 | 47 |
ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 5e-40 | 47 |
IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-39 | 46 |
unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-39 | 46 |
c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 6e-36 | 45 |
Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 3e-40 | 45 |
Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 3e-40 | 45 |
CDC7B_2035 | YP_005163476.1 | transposase-like protein | Not tested | Not named | Protein | 2e-35 | 45 |
CDCE8392_1958 | YP_005134489.1 | transposase-like protein | Not tested | Not named | Protein | 3e-41 | 44 |
CDCE8392_1985 | YP_005134516.1 | transposase-like protein | Not tested | Not named | Protein | 2e-29 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Srot_2379 | YP_003659655.1 | integrase catalytic subunit | VFG1602 | Protein | 9e-40 | 46 |