Gene Information

Name : Srot_2117 (Srot_2117)
Accession : YP_003659402.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2140957 - 2141826 bp
Length : 870 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: mjl:Mjls_2153 integrase catalytic subunit

DNA sequence :
ATGATCTTCCGGCTGGTCCACGAGCTGGCCGACGACGGTTTCCCCGTCGCGGCGGCCTGCCGGGTCCTGGGCGTCTCCCG
CTCGGGCTATTACGACTGGGCGTCGCGCCCGCCGAGCGTCAGAGAGGTGGCGGACGAGGCGCTGACCGGCGTGATCCGAA
CCGTCTGGTCGGGCTCGCGGCAGACCTACGGGGTCCGGCGGGTCCATGCGGAGCTGCGCATGGGCCTGGGCCTTCGGGTC
GGGCTGCGCCGGGTCGGGCGCCTGATGCGCCTGGCCGGGATCGCCGGGGTCCACCGCCGCAGGCGGCGCGGGAACAAGCC
CGCCCAAGCGGTCCACCCGGACCTGGTCGCCCGCAAGTTCACCGCCGACCGCCCGGACAAGCTGTGGGTCACCGACATCA
CCGAGCACGCCACGGACGAGGGCAAGGTCTACTGCGCCGCGGTCCTGGACGTGTTCTCCCGCCGGGTCGTGGGCTGGTCG
ATAGCCGACCACCTGCGCGCCGAGCTGGTGGTCGACGCCCTGGACATGGCCCGCTGGCGGCGCAAGCCCCGCGGCACGGT
CGTCCATTCGGACAGGGGCGGGCAATATGTGTCGTGGATCTTCGGCCACCGGCTCAGAGAGGCCGGCCTGCTCGGGTCGA
TGGGAAAAGTCGCCTGCGCCCTGGACAACGCCATGATGGAGTCGTTCTTCTCGTCCATGCAGGTCGAACTCCTCGACCGC
AGAGAGTGGGCCACCCGAGCGGAGCTCGCCAACGCCATATTCGAATACATCGAAGCCTGGTACAACCCCCTCAGACGCCA
CAGCGGCATCGGCTACCACAGCCCCGCCGCCTACGAGAACCTGCCCGCCCTCACCGAGAGCGTGGCATAA

Protein sequence :
MIFRLVHELADDGFPVAAACRVLGVSRSGYYDWASRPPSVREVADEALTGVIRTVWSGSRQTYGVRRVHAELRMGLGLRV
GLRRVGRLMRLAGIAGVHRRRRRGNKPAQAVHPDLVARKFTADRPDKLWVTDITEHATDEGKVYCAAVLDVFSRRVVGWS
IADHLRAELVVDALDMARWRRKPRGTVVHSDRGGQYVSWIFGHRLREAGLLGSMGKVACALDNAMMESFFSSMQVELLDR
REWATRAELANAIFEYIEAWYNPLRRHSGIGYHSPAAYENLPALTESVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 7e-16 41