Gene Information

Name : Srot_2059 (Srot_2059)
Accession : YP_003659346.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2082140 - 2083657 bp
Length : 1518 bp
Strand : +
Note : KEGG: nfa:nfa29950 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
GTGAAACACGCAGCACCGGGCGCCGAGGGGAGCGCGCTCACTTTCCAAGCAAGCTACGACAACTTCATCGGCGGCGAATG
GACCGCGCCTGTCGAAGGCGGATACTTCGACAACCCCTCGCCCGTGGACGGCCGCGTGTTCACCAAGATCGCCCGCAGCA
CCGAGGCGGACGTGGATCTGGCGCTGGACGCGGCGCATCGGGCCGCGGACACATGGGGCGCCACTTCGGTGACCGAGCGG
GCCAATCTCCTGCTGAAGGTCGCCGACCGCCTCGAAGAGAACCTCACCGCGTTGGCCGTCGCCGAGACCTGGGACAACGG
CAAGCCGATCCGGGAAAGCCTCGGAGCCGACCTGCCCTTGGCCGTGGACCAGTTCCGGTACTTCGCCTCAGCGATCCGCA
GCCAGGAGGGCGGCGTCTCCGAGATCGACGCGGACACCGTGGCGTACCACTTCCACGAGCCGCTCGGCGTCGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTCATGGCAGCGTGGAAACTCGCGCCCGCGCTGGCAGCGGGCAACTGCGTCGTCAT
CAAACCCGCCGAGCAGACCCCGGCCTCGATCATGGTGCTCATGGAGATCATCGGCGACATGTTGCCGCCGGGCGTGTTGA
ACGTCGTCAACGGCTTCGGCCCTGAGGCCGGCAAATCCCTCGCCTCCAGCCCGAAGATCGCGAAAGTCGCGTTCACCGGC
GAGACCAGCACGGGCAAACTCATCCTGCAATACGCGACCGAGAACCTCATCCCGGTGACCTTGGAGCTGGGCGGCAAAAG
CCCGAACATCTTCTTGTCCGACGTGATGGCCAAGGACGACGACTTCCTCGACAAAGCAGTCGAAGGCTTCGTGATGTTCG
CGCTCAACCAGGGCGAGGTGTGCACTTGTCCGTCGCGCGCCATTGTCTGCGCCGACATCTACGACGAGTTCATCGCGCGC
TGTGTCGAGCGGACCAGGGCCATCAAAGGCGGCGACCCGTTGGACGAGGAGACCATGATCGGGGCCCAGGCCAGCGCCGA
GCAACAAGAGAAAATCCTCAAGTACATCGACATCGGCAAAGCCGAAGGCGCGCAGTTGCTGATCGGCGGCAACGAGCGCG
TGGTGGACGAGCACCCGAACGGCCACTATGTCGAGCCGACTATCTTCAAGGGCACGAACACGATGCGGATCTTCCAGGAG
GAGATCTTCGGCCCGGTTCTCTCGGTGACCACATGCGACTCTGTGGACGAGGCGTTGAAGATCGCCAACGACACCCAGTA
CGGCCTGGGGGCCGGTGTGTGGACCCGCGATATGAACACCGCCTACCGGCTCGGCCGGGGCTTGAAAGCAGGCCGAGTGT
GGACGAATTGCTACCACGCGTACCCCGCGCACGCGGCGTTCGGCGGCTACAAGAAGTCCGGGATCGGACGCGAGAACCAC
AAGATGATGCTGGAACACTACCAACAGACGAAAAACTTGCTGGTCAGCTACGCGGCGAACAAAGTCGGCTTCTTCTGA

Protein sequence :
MKHAAPGAEGSALTFQASYDNFIGGEWTAPVEGGYFDNPSPVDGRVFTKIARSTEADVDLALDAAHRAADTWGATSVTER
ANLLLKVADRLEENLTALAVAETWDNGKPIRESLGADLPLAVDQFRYFASAIRSQEGGVSEIDADTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVIKPAEQTPASIMVLMEIIGDMLPPGVLNVVNGFGPEAGKSLASSPKIAKVAFTG
ETSTGKLILQYATENLIPVTLELGGKSPNIFLSDVMAKDDDFLDKAVEGFVMFALNQGEVCTCPSRAIVCADIYDEFIAR
CVERTRAIKGGDPLDEETMIGAQASAEQQEKILKYIDIGKAEGAQLLIGGNERVVDEHPNGHYVEPTIFKGTNTMRIFQE
EIFGPVLSVTTCDSVDEALKIANDTQYGLGAGVWTRDMNTAYRLGRGLKAGRVWTNCYHAYPAHAAFGGYKKSGIGRENH
KMMLEHYQQTKNLLVSYAANKVGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-135 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-143 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-142 62
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-64 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Srot_2059 YP_003659346.1 aldehyde dehydrogenase VFG0082 Protein 1e-135 63