Gene Information

Name : Srot_1966 (Srot_1966)
Accession : YP_003659254.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1988282 - 1988635 bp
Length : 354 bp
Strand : -
Note : KEGG: gbr:Gbro_2090 ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19

DNA sequence :
ATGAACAGGCTTGATTTCGTCGAGAAACCGCTGCTGCGCGACGACCTCCCGGATTTCGGACCGGGCGACACAGTCGAAGT
GCACGTCAAGGTCATTGAGGGCTCCAAGGAGCGCATCCAGGTCTTCAAGGGGGCCGTCATCCGCCGCCAGGGCGGCGGGA
TCCGCGAGACTTTCACCGTGCGCAAGGTGTCCTTCGGCGTTGGCGTCGAGCGGACCTTCCCCGTGCACAGCGGCAACATC
GCCAAGATCGATGTCGTGACTCGGGGCGACGTTCGCCGCGCGAAGCTGTACTACCTGCGCGATCTGCGCGGGAAGGCCGC
GAAGATCAAGGAGAAGCGCGTCGCCGCCCGATGA

Protein sequence :
MNRLDFVEKPLLRDDLPDFGPGDTVEVHVKVIEGSKERIQVFKGAVIRRQGGGIRETFTVRKVSFGVGVERTFPVHSGNI
AKIDVVTRGDVRRAKLYYLRDLRGKAAKIKEKRVAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-32 67
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 9e-23 54