Gene Information

Name : Srot_1824 (Srot_1824)
Accession : YP_003659115.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : helicase c2
Function : -
COG functional category : K : Transcription
COG ID : COG1199
EC number : -
Position : 1830686 - 1832776 bp
Length : 2091 bp
Strand : +
Note : SMART: helicase c2; DEAD-like helicase; KEGG: rop:ROP_11530 ATP-dependent DNA helicase

DNA sequence :
GTGGCGTACACTTGTTCGGTGCCTCATGCCGCGCTCAAGCTTCTCGACGTCGCGGTGGCCCATGTGGGCGGGGCGAAGCG
CGAGCCGCAGGCCGTCATGGCGAAAGCGGTCGCGGAGACATTCAACGCCAAACGCAGCCCCGCTCCCGGCGGCGGGCGCG
TCCTCGCCGTCCAAGCCGGCCCCGGCACCGGGAAATCGCTCGCATACCTCGTTCCAGCCGTCGAGCACGCGGTGCGGGCG
GGCGAGCCGGTTGTGGTCTCCACCGCCACCATCGCCCTGCAGCGCCAACTGGTGGACCGGGACCTGCCCGCGCTGAGCGC
GGCATTGGCCAAAACGCTCGGCAGAGCGCCGACATTCTCATTGCTCAAAGGGCGGGGGAACTACCTCTGCCTGCACAAGC
TCACCGCGCCGCTGGCCGACGAGCCGGATTCTGGGGCTGCGCCCGCAGGCTCTGCGAGCGGGAGCCTGTTCGATCCGCCT
CGGCCGACAGGCAAAAAAGCCCCTGCGCAATCCGACCTCGGAGCCGAAGTCGCCCGCATCGCCGAATGGGCGGACGGAAC
CACGACCGGGGACCGCGAGGAACTGCGCCCCGGCGTGAGCGATCGGGCCTGGCGGCAATTCTCAGTCACCCAAGGCGAGT
GCCTGGGCATGAGCCGCTGCCCCAAAGGGACCTCCTGCTGGGCGGAAAAGGCAAAGACAGCGTCGGCGAAAGTCGATGTG
GTGGTCACGAACCACGCCATGCTCGCGATCGACCTGATCGGCGAGAACTCGTTGCTGCCGGAGCACACGTCCGTCGTTGT
GGACGAGGCGCACGAGCTCGTGGACAATGTGACCGGGGCCGCGACAGGGGCGACCGGGCCAGGCCCGGTCGCCATTGCCG
TGCGGCGCTGCGGGAAGCTGCTCACCGACGAGCTGCGCGCGCGCCTGGAAAGCGCGGCCGACACGCTGGGCAGGATCATC
GGCGAGGCCCCCGAAGGGTTCTGGCGACAGGCCCCCGATGGCGCGCCGGAAGCAGTGGCCGTGCTGCAGAGCGCCGCGGC
GGCGGCCCTGGCCGGCGTCAGCGCCCTGCCAAAGGCGGAAAACCCGGCAGAGACCGCCTCCCGGCTCTCCGCCATGACAA
GCCTTGAGGACGTCGTCGCGGTCTGCGGCCGAGTCAAGCGCGTCTTCGCCGAACGCGACCTCGCCGCGCGGACCGAAGCG
GTGTGGACCACCGCCCCGCCCGGCAAAGACTGGCGGGACAAGGAGCCGCCCAGCCTGCTCCACGTCGCGCCGGTGACCGT
GGGGGCCCTGTTGCGCGAGCGCCTCTTCGGCGAGAAGACTGTGGTGCTCACCTCCGCGACATTGACGCCCGGCGGCCATT
TCGACGATCTCGCGGGCGACTGGGGGCTCGACGACGCGAACGCTCCCCCCTGGTCCTCGCTCGACGTCGGCTCGCCATTC
GCGCACAAAGCGGCAGGCATCTGCTACATCGCCAAGCACCTCCCCCCGCCGGGCCGCGACGGCGCGGACCCCGCGCAGCA
CGATGTGCTGCGCGAGCTGGTCGAAGCCGCGGGCGGGCGCACCCTCGGCTTGTTCTCCTCGCTGCGCGCGGCGCAAGCTG
CCGCGGAAGCGATGCGCGCGACGCTCGACACGCCTGTGCTCTGTCAAGGCGAAGACACCACTGGCGCGTTGATCGAGACC
TTCGCGGGCGATGCGCAAACCTCGCTGTTCGGCACTCTCTCGCTCTGGCAAGGGGTGGATGTGCCGGGGCCGTCGCTCTC
CTTAGTGGTGATCGACCGAATCCCTTTCCCGCGCCCTGACGACCCGCTCACCATCGCGCGCACCCACGCGGCGCAGGCCA
AGGGGCGCAACGGCTTCCTTTCGGTGTCGGCAAGCCATGCCGCGGTGCTGCTCGCCCAGGGCTTCGGGCGCCTTTTGCGC
TCGGTCTCGGACCGAGGCGTGGTCGCCGTGCTCGACTCCCGACTGGCCACCGCGCGGTATGCTGACTATCTCAAAGCCAG
TCTTCCCCCGTTCTGGGAGACCACGGATCTTGCGGTGACGAAGGCGGCCTTGCGCCGCTTGCGCGAACAGGACGACAAGC
CAAAGCTCTGA

Protein sequence :
MAYTCSVPHAALKLLDVAVAHVGGAKREPQAVMAKAVAETFNAKRSPAPGGGRVLAVQAGPGTGKSLAYLVPAVEHAVRA
GEPVVVSTATIALQRQLVDRDLPALSAALAKTLGRAPTFSLLKGRGNYLCLHKLTAPLADEPDSGAAPAGSASGSLFDPP
RPTGKKAPAQSDLGAEVARIAEWADGTTTGDREELRPGVSDRAWRQFSVTQGECLGMSRCPKGTSCWAEKAKTASAKVDV
VVTNHAMLAIDLIGENSLLPEHTSVVVDEAHELVDNVTGAATGATGPGPVAIAVRRCGKLLTDELRARLESAADTLGRII
GEAPEGFWRQAPDGAPEAVAVLQSAAAAALAGVSALPKAENPAETASRLSAMTSLEDVVAVCGRVKRVFAERDLAARTEA
VWTTAPPGKDWRDKEPPSLLHVAPVTVGALLRERLFGEKTVVLTSATLTPGGHFDDLAGDWGLDDANAPPWSSLDVGSPF
AHKAAGICYIAKHLPPPGRDGADPAQHDVLRELVEAAGGRTLGLFSSLRAAQAAAEAMRATLDTPVLCQGEDTTGALIET
FAGDAQTSLFGTLSLWQGVDVPGPSLSLVVIDRIPFPRPDDPLTIARTHAAQAKGRNGFLSVSASHAAVLLAQGFGRLLR
SVSDRGVVAVLDSRLATARYADYLKASLPPFWETTDLAVTKAALRRLREQDDKPKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 1e-107 46