Gene Information

Name : Srot_1801 (Srot_1801)
Accession : YP_003659092.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1809252 - 1810151 bp
Length : 900 bp
Strand : -
Note : KEGG: mjl:Mjls_2287 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; indole-3- glycerol phosphate synthase

DNA sequence :
ATGACAGCGCAGCAGACCCATCAGACTGGCACCGCCAACGTCAAACGCGGCATGGCCGAAATGCTCAAGGGCGGTGTGAT
CATGGACGTGGTCACGCCCGAGCAGGCGAAAATCGCCGAAGACGCGGGCGCTGTGGCCGTCATGGCGCTGGAGCGCGTCC
CCGCCGACATCCGCGCCCAGGGCGGCGTGGCCAGGATGAGCGACCCGGAGATGATCGCCGGGATCATCGACGCGGTGAGC
GTCCCGGTCATGGCCAAGGCGCGGATCGGCCATTTCGTGGAGGCGCAGATCTTGCAAAGCCTCGGGGTGGACTACATCGA
CGAGTCCGAGGTGCTGACCCCTGCGGACTACACCCACCACATCGACAAGTGGCAGTTCACCGTCCCGTTCGTGTGCGGGG
CGACCAATCTCGGCGAGGCCCTGCGCCGGATCGCCGAGGGCGCGGCGATGATTCGCTCCAAGGGCGAGGCTGGCACGGGC
GACGTCTCGAACGCCACGACGCATATGCGCTCGATCGGCGGTGAGATCCGGAGGCTGGCCGCTCTGGATGAGTCCGAGCT
CTACGTCGCCGCGAAGGAATTGCAGGCGCCGGTCGATCTGGTCAAAGAGGTCGCGGCCGCAGGGCGGCTGCCCGTGGTGC
TTTTCACAGCGGGCGGGATCGCCACGCCCGCGGACGCAGCGCTCATGCGCCAGCTCGGGGCCGAGGGCGTGTTCGTCGGC
TCGGGCATCTTCAAATCCGGCGACCCGTCGGCGCGGGCGAAGGCCATCGTCGCGGCGAGCACGTACTATGACGACCCCGA
CATGCTCGCCAAGATTTCCCGAGGCCTCGGCGAGGCCATGGTGGGCATCACCGTGGACAGCCTTCCCGTGTCACACCGGC
TCGCCGAGCGCGGCTGGTAG

Protein sequence :
MTAQQTHQTGTANVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVARMSDPEMIAGIIDAVS
VPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYTHHIDKWQFTVPFVCGATNLGEALRRIAEGAAMIRSKGEAGTG
DVSNATTHMRSIGGEIRRLAALDESELYVAAKELQAPVDLVKEVAAAGRLPVVLFTAGGIATPADAALMRQLGAEGVFVG
SGIFKSGDPSARAKAIVAASTYYDDPDMLAKISRGLGEAMVGITVDSLPVSHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-111 80
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-111 80
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-111 79