|
Name : Srot_1778 (Srot_1778) Accession : YP_003659069.1 Strain : Segniliparus rotundus DSM 44985 Genome accession: NC_014168 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1784485 - 1786206 bp Length : 1722 bp Strand : - Note : TIGRFAM: urease, subunit alpha; KEGG: nfa:nfa25260 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein DNA sequence : GTGAGCCGTATCGAGCGCCTTCGTTACGTTGGGCTCTACGGTCCGACCGTCGGGGACCGCATCCGGCTCGCGGACACGGA CCTGTTCGTCGAAGTCACCGAGGACCTGTGCGGCGGCCCCGGCAAAGCGGGCGACGAGGCGGTGTTCGGCGGCGGGAAAG TCTTGCGCGAGTCGATGGGGCAAGGGCGCGCCACCCGAGCCGAAGGCGCCCCGGACACGGTCATCACCGGCGCGGTGGTG TTGGACTGGTGGGGAGTGGTCAAAGCCGACGTCGGCATCCGGGACGGGCGTATTGCCGCCCTGGGCAAAGCCGGCAATCC GGACACGATGCACGGTGTGCACCCGGACCTCGTCGTCGGCCCGAGCACCGAGGTGATCTCTGGGAACGGCAAGATCCTCA CGGCGGGCGGGATCGACTGCCATGTGCATTTCATCTGCCCCCAGATCATCCCCGAAGCCCTCGGCTCAGGACTGACGACC CTCATCGGCGGCGGCACGGGCCCCGCGGAGGGCTCGAAGGCGACCACGGTGACCCCCGGCGAATGGCATCTCGCGCGGAT GCTGGAGGCGTTGGACGGGGAGCCGATGAACTTCGTCCTCCTCGGCAAAGGTTCGACCGTTTCTGAAGAGGGCATGTGGG AGCAGCTGCGCGCCGGGGCCTGCGGATTCAAAATCCACGAGGACTGGGGCGCGACCCCGGCCGCGATTGACGCGTGCCTG CGCGTCGCGGACCAGTCGGGCGTGCAGGTGGCTTTGCACACCGACACCCTCAACGAGCTCGGCTACATCGCGGACACCCT CGCCGCGATCCGAGGCCGGTGCATCCACACCTATCACACCGAGGGCGCGGGAGGCGGGCACGCGCCGGACATCATCACTG TCGCCTCGCAACCGAATGTGCTGCCGAGTTCGACGAACCCCACCCGGCCCCACACGGTCAACACGATTGACGAGCACCTG GACATGCTCATGGTCTGCCACCACCTCAACCCGGCGATCCCCGAGGACCTCGCGTTCGCCGAAAGCCGCATCCGGCCGTC CACCATCGCCGCCGAGGACCTGCTGCACGATCTTGGCGCGATCTCCATGATCGGAAGCGACGCGCAGGCCATGGGCAGAG TCGGGGAAGTCATCATCCGAACCTGGCAGAGCGCGCACATGATGAAATTGCGGCGCGGCGCGCTCCCCGGCGACGGGATG GCCGACAACAACCGCGCCCGCCGGTACATCGCCAAGTACACGATCTGCCCGGCCATCGCGCACGGACTCGACCATGAGAT CGGCAGCGTCGAAGTGGGCAAGCTCGCCGACCTGGTGCTCTGGGACACGGCGTTCTTCGGCGTGCGCCCGCATCTGGTGC TCAAAGGGGGAGCGATCGCTTTGGCGCAGATGGGAGACGCGAACGCCTCTATCCCGACCCCGCAGCCCGTGTTGCCCAGG CCGATGTTCGGAGCCTCCGCCGCCGCTGCGGCCGCGACTTCGGCGCACTTCGTCGCGGAGGCCGCCGTTCAGGCGGGACT CGCCGACCGGCTCGCGGTGCGGCGGCGGTTGGTCGCGGCGAAGGACGTGCGCGCGGTGCGCAAGGAAGACCTCAAGCTCA ACGAGGCGATGCCAGACATCCAGGTGGACCCGGACACCTTCACGGTGCGGGTGGACGGCGAGGTCTTCGAGGAACAGCCC GCAGCCGTGCTGCCCATGGCGCAGCGGTATTTCTTGTTCTGA Protein sequence : MSRIERLRYVGLYGPTVGDRIRLADTDLFVEVTEDLCGGPGKAGDEAVFGGGKVLRESMGQGRATRAEGAPDTVITGAVV LDWWGVVKADVGIRDGRIAALGKAGNPDTMHGVHPDLVVGPSTEVISGNGKILTAGGIDCHVHFICPQIIPEALGSGLTT LIGGGTGPAEGSKATTVTPGEWHLARMLEALDGEPMNFVLLGKGSTVSEEGMWEQLRAGACGFKIHEDWGATPAAIDACL RVADQSGVQVALHTDTLNELGYIADTLAAIRGRCIHTYHTEGAGGGHAPDIITVASQPNVLPSSTNPTRPHTVNTIDEHL DMLMVCHHLNPAIPEDLAFAESRIRPSTIAAEDLLHDLGAISMIGSDAQAMGRVGEVIIRTWQSAHMMKLRRGALPGDGM ADNNRARRYIAKYTICPAIAHGLDHEIGSVEVGKLADLVLWDTAFFGVRPHLVLKGGAIALAQMGDANASIPTPQPVLPR PMFGASAAAAAATSAHFVAEAAVQAGLADRLAVRRRLVAAKDVRAVRKEDLKLNEAMPDIQVDPDTFTVRVDGEVFEEQP AAVLPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 5e-147 | 60 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 5e-147 | 60 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-138 | 58 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-138 | 58 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-138 | 58 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-138 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Srot_1778 | YP_003659069.1 | urease subunit alpha | VFG0270 | Protein | 1e-128 | 55 |
