Gene Information

Name : Srot_1307 (Srot_1307)
Accession : YP_003658606.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : UMUC domain-containing protein DNA-repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : -
Position : 1279048 - 1280292 bp
Length : 1245 bp
Strand : +
Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: hha:Hhal_1279 DNA-directed DNA polymerase

DNA sequence :
GTGGCCGCGCTGGTGGACGTGGACTGTATGTATGTGTCCTGCGAGCGGGTTTTCGACCCCGCTTTGCGCGGCCTTCCGGT
CGTGGTGCTGTCGAACAATGACGGCTGTGTGGTGTCCCGCTCGGCGGAGGCGAAAACGCTCGGCGTCGCGATGGGCCAGC
CGTGGTTCCAGGTCCGCAAGGACCCCCGCTTTGCGCGACGGGTTCTCGCGCGGTCCTCGAACTACGAGTTGTACGCGGAC
ATGTCCAACCGGTTCGTCGCCGTGCTGGAGGCCGTGTGCGCGCGTGTCGACCAGTACTCGATCGATGAGTGCTTCCTCTG
GCTTCCCAGGGCTGAGTCGATGGAGCTCGCCAGGTCGATACGAGAGCTGTGCGGCAAGTGGGCGGGCTTGCCGGTGCGCG
TGGGCGTCGGTGAGACCAGGACCTTGGCGAAGGCGGCCAGCCACGAGGCGAAGGCCCCTGGGCGCGCCGGTGTGTGCGAT
CTGACCCGATGGCAGCAGGGCGCAGTGGACGAACTCTTGGCGCGCACGCCGGTCGCCGATGTGTGGGGCGTCGGGCGCCG
TCTCGCGAGCAAGCTCGGCTCGGTCGGCGTCCGCACGGCCATCGATCTGAAATCGCTCGAACCGAGGCGGGCGCGAGGGC
TGGGCACCGTTCAGCTTGAGCGCACTGTCCGTGAGCTCGGCGGAGTCCGTTGCGACGGGGCGCAGGAGCCTGCTGAGTCG
CATCAGATGGTCTGCTCGCGGATGTTCGGCAGGCCGGTCGTCGATGCTGAAGAAATGCTTGCGGCGATCACTGACCGGAT
CGACCAAGTCGCGGCCCGCTTGCGCGGGCGGGGCATGGACGCGGGCCACCTCGCGGTGTCGATGGCCACGTCGCCGTACG
CGCAAGGCCCCCGCAGCGCCGTGACAGCGTGCGCGAGCTTGCCGCAGCCGAGCGACGATCCGGTCTTGCTCGCCTGTGCC
GCCCGCGAGCTCGGCGAGCGGCTGTTCCAACCGGGGTGCTCGTACATTCGTTGCGGGGTGGTCCTCGGAGATTTGGCTCC
GGCGGGGGAGCGCATGGCCTGGGGCGCCGAGCCGGAATTGTCCCCGAGCGTTTGGCAGACGGTGGACCGTGTGCGTGCCA
AGCATGGCAGGGACTCCGTGACCCTTGGCCCGCCCCGGCTGCGGGCCTGGGAGATGCGCCGGGACTTCCTTTCGCCCGCC
TACACCACCCGTTGGGACCAACTGCCGCTGGCGAGGGCGGTGTGA

Protein sequence :
MAALVDVDCMYVSCERVFDPALRGLPVVVLSNNDGCVVSRSAEAKTLGVAMGQPWFQVRKDPRFARRVLARSSNYELYAD
MSNRFVAVLEAVCARVDQYSIDECFLWLPRAESMELARSIRELCGKWAGLPVRVGVGETRTLAKAASHEAKAPGRAGVCD
LTRWQQGAVDELLARTPVADVWGVGRRLASKLGSVGVRTAIDLKSLEPRRARGLGTVQLERTVRELGGVRCDGAQEPAES
HQMVCSRMFGRPVVDAEEMLAAITDRIDQVAARLRGRGMDAGHLAVSMATSPYAQGPRSAVTACASLPQPSDDPVLLACA
ARELGERLFQPGCSYIRCGVVLGDLAPAGERMAWGAEPELSPSVWQTVDRVRAKHGRDSVTLGPPRLRAWEMRRDFLSPA
YTTRWDQLPLARAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 8e-61 42
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 8e-61 42