Gene Information

Name : Srot_1121 (Srot_1121)
Accession : YP_003658425.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transporter inner membrane component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 1098155 - 1099066 bp
Length : 912 bp
Strand : +
Note : PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rha:RHA1_ro04335 ABC peptide transporter permease component

DNA sequence :
GTGACCCACTATGTCGCTCCGGAGGAGCCAGAGCCCCAGGCCGCGTCCCTTGCCGAGCGCCCAGCGAAGGGGTACTGGGG
TGAAACGTGGTCGCAGCTGCGGCGAAGCACGAAATTCTGGGTCTCCGCAGCGGTGCTGCTGTTCGTCCTGGCTCTCGTGG
CAGCCCCAGATTTTTTCAGCGGCACAGACCCGCGTTCTTGCGACCTCGAGCAAAGCAAGTCGCCGCCGAGCGCGGCGCAT
CCCTTCGGTGTGGACTTCCAGGGCTGCGACATTTACTCCCGCACCGTCCACGGCGCGCGGGCCTCTGTGGAAGTCGGCGT
GGGCACTGCGCTGGCGGTGTTCCTCGTGGGCGGCTTCGTCGGCGTCCTCGCGGGGTATTTCGGAGGTTGGGCGGACGGTG
TGCTGTCCAGGGCTTCCGAGATTTTCGCAGGCGTGCCGCTGATCCTCGCCGCCGTGGTGCTGCTGAAAATCTTGCCGCAA
CGGGGAGTCTTCACGATCATCGCGATCCTCGCCGTCTTCAGCTGGCCGCAAATCGCCCGTGTCGCCAGAGCCGCCGCGGC
CATGGCTCGGTCCAAAGACTACGTGCTCGCCGCTCGGTCGCTCGGGGTTTCCACGCCCAAGATCCTGCTGCGGCACATCC
TGCCCAACTCTCTCGGCCCCATCATCGCCACCACGACGATCTCGCTCGGCGTTTTCATCGTCGCCGAATCGACCCTTTCC
TACATGGGCATCGGCCTGCCGCCCTCGGTCGTGTCCTGGGGCGCCGACATTTCCAGCGGCCAGGCTCGGCTCTTGGAGGG
CTCGGCGATGATGTTCTACCCGGCGGCGGCGCTCGGCACAACCGTGCTGGCGTTCATCCTGCTCGGCGACGCGCTGCGCG
ACGCCACGGACCCGAAGGCGAGACGGCGTTGA

Protein sequence :
MTHYVAPEEPEPQAASLAERPAKGYWGETWSQLRRSTKFWVSAAVLLFVLALVAAPDFFSGTDPRSCDLEQSKSPPSAAH
PFGVDFQGCDIYSRTVHGARASVEVGVGTALAVFLVGGFVGVLAGYFGGWADGVLSRASEIFAGVPLILAAVVLLKILPQ
RGVFTIIAILAVFSWPQIARVARAAAAMARSKDYVLAARSLGVSTPKILLRHILPNSLGPIIATTTISLGVFIVAESTLS
YMGIGLPPSVVSWGADISSGQARLLEGSAMMFYPAAALGTTVLAFILLGDALRDATDPKARRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 1e-53 50