Gene Information

Name : Srot_1119 (Srot_1119)
Accession : YP_003658423.1
Strain : Segniliparus rotundus DSM 44985
Genome accession: NC_014168
Putative virulence/resistance : Unknown
Product : family 5 extracellular solute-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 1095541 - 1097232 bp
Length : 1692 bp
Strand : +
Note : PFAM: extracellular solute-binding protein family 5; KEGG: mpa:MAP0409 hypothetical protein

DNA sequence :
GTGCGGCGGTGCATCGCTCAATTCCATCGAAAACTCCTGGGCGAGGGTGTTTCGAACCGCCGCCCGCTGCCCGCGCGACA
GATGTTTTCAGCGGCGGTCGCGGTCTTCGTGCTCGTCGGCGCTTTGGCCGCGTGCGCGCCGACGCGGGCCGGGGCGGACA
GCCGTTTTATCACGGTGCTCTCCATCGAGCCGCAGAACCCGCTCATCCCCTCGAACACGAACGAGATCGGCGGCGGCTGG
ATCGTGGACCGGCTCTTCGCCGGGCTCGAATACCTTGACGCGGACGGCAACCCGCACGAGGACGCGGCGGAGTCGGTGGC
GCTCTCCGCCGACAGACTCGTCTACACGATCAACATCAGGCCGGGCCAGACGTTCAGCAACGGCGAACCGGTGACCGCGC
GCTCGTACGTGGACGCGTGGAACTTCGGGGCGCTCTCGACCAACGCGCAGTTGCAAGCCTCGGCCTACGAGAAGATCGCG
GGCTACGAAGATCTCGCGGCCGATCCGCCGAGGTCCAAGGCGATGTCCGGGCTGAAGGTGCTCGGCGACCTCGTCTTCAC
CGTGACGCTTTCCCAGCCCGCCGTCGACTTCAAGAGCGCGCTCGCCTGGTCGCCGTACTACCCGATGCCGCGCGTGGCGT
ACCGCGACGTCCGGGCGTTCGGCGAGCGCCCGATCGGCAACGGCCCCTACGAGCTCGCCAGCCCGGACGCGTGGCAGCAC
AACGTGCGGATCGACCTCAAGCGCAGCCCCGCTTACCACGGCCCGCGCCGGGTGAAGAACGACGGCCTCTCGCTGATCTT
CTACCAGTCCCACGAGGCGGGCTACGCGGATCTCGTCGGCGGCAATCTCGACTTCCTGTACTTGTTGCCCGACAACGTCC
TCGGCGTCTACAAGCGCGACCTCGGCGACCGTTGGCTCAAGCAACCGACCGCGCAGAACTTGCAGTTCTCCATCCCGTTC
TATCTGCCGCATTTCAACGGCGAAGAGGGGCGGCTGCGCCGCCGCGCGATCATCGAAGCGATCAACCGGGAGCAGATCGC
GAAGGTCATCTTCTACGACACCCGCACACCGATGCGCGACTTCACCTCCTCGGCGCTGCCGGGCTTCGACCCGCACATCC
CCGGCTCGGCGGTCCTGGACTACAACCCGGAGCAGGCCCGCGCTTTGTGGGCGCAGGCGGACAGGATCTCCCCGTGGCAG
GGGACCCTTTTCTTCGTGTACAACGCCGATGGCGGCCATCAGGCGCTGGTGGACGCGACGACGAACTACCTGCGCCGCAC
TCTCGGGATCTCCGCCGAAGGCATGCCCAAACAGTCGTTCAAGGAAGTCCGCGACCTGGCGACCCGGCGCCAAATGCCCG
GTCCTTTCCGCAACGGCTGGCTGGGCGACTATCCGACCGCGCTGAATTTTCTCGAAACCCAATTCGTCACCTCGGCGGGT
TCGAACGACACGCTGTACGCGAACCCCCGGTTCGACGAGCTGCTCCGGCAGGCGGAGTCGGCGCCTGACAGGCAAGCGGC
GCTCGTTTCCATCCGGCAGGCGCAGAGCATCCTCTTCGAGGACTTGCCGGTGCTGCCGATGTTCGACTACGTGGCTGTGG
CGGGCTACTCGACCAGGCTCGACAATCCGCGCTCCACATGGAACGGCGCGCCGGACTTTGAGAATTTGCAGCTCAAGGAC
GGCCTCCGATGA

Protein sequence :
MRRCIAQFHRKLLGEGVSNRRPLPARQMFSAAVAVFVLVGALAACAPTRAGADSRFITVLSIEPQNPLIPSNTNEIGGGW
IVDRLFAGLEYLDADGNPHEDAAESVALSADRLVYTINIRPGQTFSNGEPVTARSYVDAWNFGALSTNAQLQASAYEKIA
GYEDLAADPPRSKAMSGLKVLGDLVFTVTLSQPAVDFKSALAWSPYYPMPRVAYRDVRAFGERPIGNGPYELASPDAWQH
NVRIDLKRSPAYHGPRRVKNDGLSLIFYQSHEAGYADLVGGNLDFLYLLPDNVLGVYKRDLGDRWLKQPTAQNLQFSIPF
YLPHFNGEEGRLRRRAIIEAINREQIAKVIFYDTRTPMRDFTSSALPGFDPHIPGSAVLDYNPEQARALWAQADRISPWQ
GTLFFVYNADGGHQALVDATTNYLRRTLGISAEGMPKQSFKEVRDLATRRQMPGPFRNGWLGDYPTALNFLETQFVTSAG
SNDTLYANPRFDELLRQAESAPDRQAALVSIRQAQSILFEDLPVLPMFDYVAVAGYSTRLDNPRSTWNGAPDFENLQLKD
GLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 2e-96 44