Gene Information

Name : Arnit_0781 (Arnit_0781)
Accession : YP_003654952.1
Strain : Arcobacter nitrofigilis DSM 7299
Genome accession: NC_014166
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 769807 - 770460 bp
Length : 654 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: abu:Abu_0542 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8ES85 ABC transporter

DNA sequence :
ATGAACGACCAGCCTATACTACAAGCAAAAAATATCTCTCATAAATTTGATTATGAACTTTTTAATAATGTAAATCTTTC
ATTAAATGAAAAAGAATCAATAGCTATTATTGGAAAAAGTGGAAGTGGTAAATCAACTTTACTTAATATAATCTCATCTC
TTTTAAAGCCAGACGATGGCGAAGTGATTTTTGAAAATCAAAATATTTATACTATAAAGAATAAAAAGCTTTTAAACATA
AGAAGAGAAGATTTTGGTATAATATTTCAAGCACATTATCTTTTTAGAGGTTTTACAGCAAATGAAAACTTACAAATTGC
TCAATTCTTAAGTAATGAAAAAGTTGATGAAGAACTTTTAAAAAGTTTAGATATTAATCATGTCTTGCATCAAGGTATTG
GTGAATTAAGTGGTGGTCAACAGCAAAGATTATCTATTGCTAGGGTTTTAACAAAAAAACCAAAAATAATTTTTGCTGAT
GAACCAACAGGAAATTTAGATAAAGATACTGCACATGATGTAATGAATACTTTATTTGAATATATAAAGTCTAATAATGC
TGGATTAGTTCTTGTAACACATGAAGAAGATATCGCTTTTAAATGTGACAAGGTTTATAAACTAGTTGATTTGGAACTAC
AGGAGATTAAGTGA

Protein sequence :
MNDQPILQAKNISHKFDYELFNNVNLSLNEKESIAIIGKSGSGKSTLLNIISSLLKPDDGEVIFENQNIYTIKNKKLLNI
RREDFGIIFQAHYLFRGFTANENLQIAQFLSNEKVDEELLKSLDINHVLHQGIGELSGGQQQRLSIARVLTKKPKIIFAD
EPTGNLDKDTAHDVMNTLFEYIKSNNAGLVLVTHEEDIAFKCDKVYKLVDLELQEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41