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Name : Arnit_0571 (Arnit_0571) Accession : YP_003654742.1 Strain : Arcobacter nitrofigilis DSM 7299 Genome accession: NC_014166 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 557675 - 558919 bp Length : 1245 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195:IPR002317:IPR018156:IPR010978:IPR 015866:IPR002314; KEGG: abu:Abu_0345 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA l DNA sequence : ATGATTGATATTAAACTATTACAAAAAGATTTTGATGAAGTTGCAACAGCTTTAAATAGAAAAGGTGTTAGCCAAGATAT TTTAGATAATTTAAAAGCCCTTTCAGTTGATGCAAAAGCTAAAAGACAAGAGATGGAAAATGTAACTGCTGAACAAAATT CTTTATCAAAAGAGTTTGGTAGATATAAAAAAGAGGGGCTAGATATTGCACCTTTACAAGAAAATATTAATAAACTTAAA AATCAAAAACAAGAGCTAGAAGAGCAAGTTAGAGTTTTAGAAGAAGAACTTTCATCTATAATTCTAGGTGTTCCAAATAT GCCAGATAGTGATGTTCCAGATGGTGCAGATGAGAATGAAAATGTAGTATTAGAAACTATTGGAGAAAAACCAAACTTTT CTTTTGAACCAAAAGAGCATTGGGATTTGGGTGAAAGTAATGGAACACTAGATTTTATAAGAGGTGTAAAACTTGCAAAA TCAAGATTTACAGCTATGAGAGGGCAAGCTGCAAAATTAGAGAGAGCACTTATTAACTATATGCTTAAGTTTAACGCAGA ACGAGGTTTTGAAGAGTGGTATGTTCCTTTTATGGCAAATACAAATGCTCTTCAAGGAACTGGGCAATTACCAAAATTTG GTGAAGATTTATTTAAAATTGAGGGTGAAGATTTGTATTTGATTCCAACTGCTGAGGTTGCTTTAACAAATCTTTATAAT GATGAAATTATACCAGTAGAAGAGTTACCTTATCTTATGACTTCTTATACTCCTTGTTTTAGAAAAGAGGCTGGAAGTGC AGGAAGAGATACTAGAGGACTGATTCGTCAGCATCAGTTTGATAAAGTTGAAATGGTAGCTATTACAACACAAGAACAAA GTGAAGAGGTATTTGAAAAAATGGTTGCTTGTGCAAGTGATTTATTAACTTCACTTGGACTTGCTCATCAGAAAGTTATG CTTTGTACTGGGGATTTAGGATTTAGTGCTACAAGAACTATTGACTTAGAAGTTTGGTTACCAGGTCAAGGTAAATATAG AGAAATCTCTTCTATTTCAAATACAAGAGATTTCCAAGCAAGACGAGCAAAAATAAGATATAAAGATGGTAAGAAAAATA TTTTGGCTCACACATTAAATGGTTCTTCTTTAGCAGTCGGGCGAACACTTGTGGCTATTATGGAAAACTATCAACAAGAA GATGGAACTATTACTATTCCAGAAGTTTTAAAAAAATATATGTAA Protein sequence : MIDIKLLQKDFDEVATALNRKGVSQDILDNLKALSVDAKAKRQEMENVTAEQNSLSKEFGRYKKEGLDIAPLQENINKLK NQKQELEEQVRVLEEELSSIILGVPNMPDSDVPDGADENENVVLETIGEKPNFSFEPKEHWDLGESNGTLDFIRGVKLAK SRFTAMRGQAAKLERALINYMLKFNAERGFEEWYVPFMANTNALQGTGQLPKFGEDLFKIEGEDLYLIPTAEVALTNLYN DEIIPVEELPYLMTSYTPCFRKEAGSAGRDTRGLIRQHQFDKVEMVAITTQEQSEEVFEKMVACASDLLTSLGLAHQKVM LCTGDLGFSATRTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNILAHTLNGSSLAVGRTLVAIMENYQQE DGTITIPEVLKKYM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-83 | 48 |
