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Name : Arnit_0457 (Arnit_0457) Accession : YP_003654628.1 Strain : Arcobacter nitrofigilis DSM 7299 Genome accession: NC_014166 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 446321 - 446791 bp Length : 471 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR020081:IPR000037; KEGG: abu:Abu_2082 tmRNA-binding protein SmpB; PFAM: SmpB protein; SPTR: A8EWH6 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGCTAAGAAAGAAAAAAATATTAATTTAACATTTAAGAATAAAAAGGCATATCATGATTATTTTATACTTGAAAGTTT TGAAGCAGGTATAGAACTTCTAGGAAGTGAAGTAAAATCTATAAGAGAAGGAAGGGTAAATCTAAAAGATTCTTATATAA GAATTATAAAAAATGAAGTTTTTGTTTTGAATATGCACATCTCATATTTAGAGACTACTCATGCCATGTATAGACCTGAA GAAACAAGACCTAGGAAATTGCTTTTACATAGAAAACAAATAGATAAACTTTTTGAAAAAGTAACTAAAGATGGAATAAC CATAGTGCCCTTAAAACTGTACTTCAATGCTAAAAACTTTGCCAAACTACAAATAGCAACTGCACAGGGTAAAAAACTTT ATGATAAAAGAGCTGACTTAAAAGAAAAAAGTCTAAAAAGAGAATCAGAACAGGCAATAAAAAATTGGTAA Protein sequence : MAKKEKNINLTFKNKKAYHDYFILESFEAGIELLGSEVKSIREGRVNLKDSYIRIIKNEVFVLNMHISYLETTHAMYRPE ETRPRKLLLHRKQIDKLFEKVTKDGITIVPLKLYFNAKNFAKLQIATAQGKKLYDKRADLKEKSLKRESEQAIKNW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-24 | 46 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-28 | 45 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 6e-22 | 42 |
