Gene Information

Name : Arnit_2776 (Arnit_2776)
Accession : YP_003656931.1
Strain : Arcobacter nitrofigilis DSM 7299
Genome accession: NC_014166
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2801199 - 2802695 bp
Length : 1497 bp
Strand : -
Note : COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR016162:IPR016161:IPR015590; KEGG: abu:Abu_0378 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; PRIAM: Aldehyde dehydrogenase (NAD(+)); SPTR: A8ERS9 Aldehyde dehydrogenase; PFA

DNA sequence :
ATGGCATACGCAAAACCAACATACAAATCTCAATATGAAAACTTTATAGGTGGAGAATGGGTTGCTCCTGTAAATGGTGA
ATATTTTGATAATGTTTCTCCAGTTGATGGTGAAGTTCTAACTAGAATCCCTAGATCAAGTGAAGAAGATGTAGAACTAG
CAATTAAAGCTGCAAATAAAGCATTTGAATCTTATAAACATACATCAGTAGTTGAAAGATCAACTATGTTAAATAAGATT
GCTGATGCAATTGAAGCAAATTTAGAAGCTTTAGCTATCGCTGAAACTTTAGATAATGGAAAAGCAGTAAGAGAAACTTT
AGCCGCTGATGTACCTTTAGTTGTTGATCATTTTAGATATTTTGCTTCAGTTATTAGAGCAGAATCTGGTACGGTTGCAG
ATTTAGATGCAGATACTATTTCTCAAGAAGTTCATGAGCCATATGGTGTTGTTGCACAAATTATTCCTTGGAATTTCCCA
TTATTAATGGCTGCTTGGAAACTAGCTCCTGCTTTAGCTGCTGGAAATTGTATTGTTATGAAGCCAGCAAGTGCTACTCC
TATGTCAATTTTGATTTTAATGGAAACAATTCAATCAGTATTACCAGCAGGTTGTATCAATATTATTAATGGTGCAGGTG
GAAAAATCGGTAAATATTTATCAACTCACCCAGATATCAAAAAAGTTGGATTTACTGGTGAAACTACAACTGGTCAATTA
ATTATGCAATATGCAACTGAAAATATTATTCCTTCTACTTTAGAACTTGGTGGAAAATCACCAAATATCTTCTTGGAATC
AATTATGGATAAAGATGATGAATTTTTTGATAAAGCAATTGAAGGTTTAGTTCTATTTGCATTTAACTCAGGGGAAGTTT
GTACTTGTCCTTCAAGAGCATTAATTCAAGAGTCAATTTATGAGCCATTTATGGCAAGAGTATTAGAAAGAGTAAAAGCT
ATCAAATTAGGAGATCCTCTAGATCCAACTTGTATGATGGGTGCTCAATGTTCAACTACTCAAAAAGAAAAAATTATGGA
ATATATCAAAATAGGTAAAGAAGAAGGAGCAGAGTGTTTAATTGGTGGTGATGAATATAAAAGTGAAACACATCCAAATG
GAAACTATATTCAACCAACACTATTTAAAGGTCACAACAAAATGAGAATCTTCCAAGAAGAGATTTTTGGACCAGTTCTT
GCTGTTACTACTTTTAAAGATGAAGATGAAGCATTAGCAATTGCAAATGACACTATTTATGGATTAGGTTCTGGTGTATG
GTCAAGAGATGCTCACCAATTACATAAATTCTCAAGAGGAATTGAAGCTGGTAGAGTTTGGGTAAATTGTTATCACTTAT
ATCCATCTCATGCATCATTTGGTGGATATAAAAAATCAGGAATTGGGCGAGAAACTCATATGATGATGTTAAACTCTTAT
AGACATACTAAAAACATTCTAACTTCATATAACAAAAATAAATTAGGATTTTTCTAG

Protein sequence :
MAYAKPTYKSQYENFIGGEWVAPVNGEYFDNVSPVDGEVLTRIPRSSEEDVELAIKAANKAFESYKHTSVVERSTMLNKI
ADAIEANLEALAIAETLDNGKAVRETLAADVPLVVDHFRYFASVIRAESGTVADLDADTISQEVHEPYGVVAQIIPWNFP
LLMAAWKLAPALAAGNCIVMKPASATPMSILILMETIQSVLPAGCINIINGAGGKIGKYLSTHPDIKKVGFTGETTTGQL
IMQYATENIIPSTLELGGKSPNIFLESIMDKDDEFFDKAIEGLVLFAFNSGEVCTCPSRALIQESIYEPFMARVLERVKA
IKLGDPLDPTCMMGAQCSTTQKEKIMEYIKIGKEEGAECLIGGDEYKSETHPNGNYIQPTLFKGHNKMRIFQEEIFGPVL
AVTTFKDEDEALAIANDTIYGLGSGVWSRDAHQLHKFSRGIEAGRVWVNCYHLYPSHASFGGYKKSGIGRETHMMMLNSY
RHTKNILTSYNKNKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-116 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-122 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-122 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-122 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-121 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arnit_2776 YP_003656931.1 aldehyde dehydrogenase VFG0082 Protein 3e-116 60