Gene Information

Name : Arnit_2006 (Arnit_2006)
Accession : YP_003656167.1
Strain : Arcobacter nitrofigilis DSM 7299
Genome accession: NC_014166
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 1999412 - 2000218 bp
Length : 807 bp
Strand : -
Note : COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR017900:IPR006311:IPR017909:IPR 017896; KEGG: wsu:WS0936 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A1HNC7 4Fe-4S ferredoxin,

DNA sequence : 
ATGTCTTCAAAAAATTCAAGAAGGGATTTCTTGCAAAAAGGGCTTACAACTACAGCATTTACGATGATTGCTAGTACTAG
TGCAAACGCTTTTTCAATGAAAATTCCCGGTCGTGATAATAATGATACTAGACATATTGGTCAAAAAGGTAAACATTTTG
TTATGGTATTAGATTTGAGAAAATGTATAGGATGTCAAGCCTGTACATCTGTTTGTAGAATAGAAAATGAAGTACCAAGT
GGACAGTTTAGAACATTTGTAACAGAGACAGAAATGGGTGAATTTCCAGATGTAAGAAAGGGTTTTTTACCACAACTATG
TAATCACTGTGAAAATCCAGCTTGTGTTCCTGTTTGTCCAACTGGTGCCACTTTTAAAAGAGAAGATGGAATTGTAGTTG
TAGATAATGAAATTTGTTGGGGTTGTGGTTACTGTATTAGTGCCTGTCCTTACGATAAAAGATACTTCAATAAAAAAACA
AGAACAGCTGATAAATGTAATTTCTGTGCACAAAGAGTAGATAAAGGTTTACTCCCTGCTTGTGTAGAGACCTGTGTGGG
TGGAGCCAGAGTTTTTGGTGATATCAACGATAAAAACTCAGATGTATATAAACTTATGAGTAATTTTTCAACGACAGTAT
TAAAAGAGTCAGAAGGAACAAAACCCCAAACTTTTTATATCAATCTTGATTCAAAATTAGAAGAATTATTTTCTACAACT
CAAAGTCTAGATGATATGGTGAAAACAGAAGAGGGCTTTGAAAAAGAATGGCAAAAAGCTAGAATGGAGGCACACAATCA
TGGATAA

Protein sequence : 
MSSKNSRRDFLQKGLTTTAFTMIASTSANAFSMKIPGRDNNDTRHIGQKGKHFVMVLDLRKCIGCQACTSVCRIENEVPS
GQFRTFVTETEMGEFPDVRKGFLPQLCNHCENPACVPVCPTGATFKREDGIVVVDNEICWGCGYCISACPYDKRYFNKKT
RTADKCNFCAQRVDKGLLPACVETCVGGARVFGDINDKNSDVYKLMSNFSTTVLKESEGTKPQTFYINLDSKLEELFSTT
QSLDDMVKTEEGFEKEWQKARMEAHNHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-54 49
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-54 49
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 3e-54 47
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 4e-54 47
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 4e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arnit_2006 YP_003656167.1 4Fe-4S ferredoxin VFG0486 Protein 2e-54 47