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Name : Arnit_1747 (Arnit_1747) Accession : YP_003655908.1 Strain : Arcobacter nitrofigilis DSM 7299 Genome accession: NC_014166 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1741802 - 1744336 bp Length : 2535 bp Strand : + Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017729:IPR018368:IPR001270:IPR003593:IPR 003959:IPR013093:IPR019489; KEGG: vfi:VF_0999 ATP-dependent protease subunit; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domai DNA sequence : ATGAAAATTGAATTAAATGAAATAATAAATGCACTAGATGTTCAAACAAAGTTTTATATAGAAAGTTCTGCACAAAGATG TATAGAAAGAAGTGGAAATGAAATATTAATAGAAGATATTTTATATACGATGTTAGAAAAAGATAACAGTCTTTTTAATA AATTATTAGAACACTATGAAATAGATATACAAGAAATGTACAATCTATTACAAATGAGTACAAAAATAACAAATACAGAA AGTACAAATCCTATCTTTTCTACTATGTTAGTACAATGGTTAGAAGAGGCATTTTATACTTCTAAAATGTCATTAGAAAT AAATGAAATAACAGAATCATCATTAATTTTATCTTTATTTGATAACTCTGTAAAATATTCAACTACTTCATATTTTAAAC TTATAAAAAATATAAATACCAATGAATTAAAAGAGTTAATTTTAGGATTAAATAAAAAGAAAAGAGAAAGAAAAAGCAGT CAAAGAACTGAAACAAGTGAATTAGATAAATACACAACAAACTTAACTAAACTAGCAAAAGAGGGGAAAATTGACCCTGT TTTATGTAGAGATGATGAGATAAAGCAAGCAATTGATATTTTGCTAAGAAGAAGAAAAAATAATCCTATTTTAGTAGGAG AAGCAGGGGTTGGGAAAACTGCAGTAGTTGAAGGACTAGCTTTAAAAATTATAAATAAAGAGGTTCCTGATTATTTATAT GAAGCACAAATTTTATCTTTAGATTTAGGTGCCCTACAAGCAGGTGCAAGTGTAAAAGGTGAATTTGAAAGAAGATTACA AGCTGTGATAAGAGAAATACAATCAAGTACTCAAAATATTATACTATTTATTGATGAAGCACATACACTTATAGGTGCAG GAGGAAATGAAGGAGGGGGAGATGCTGCTAATTTATTAAAACCTGCCCTTGCAAGAGGAGAGCTAAAAACAATTGCTGCA ACAACTTGGCTTGAATACAGAAAATATTTTGAGAAAGATCCAGCATTATCAAGAAGATTTCAAAAGATAAACCTTCTTGA ACCAAGCGTAGAACAAGCAATTACAATATTAAGAGGACTTTCAAAAAAATATGAAGATGTTCATAATGTCTATATAGAAG ATGATGCCTTAAGATCAGCTGCAATTCTCTCTGCAAGATATATTACAGGAAGACAATTACCAGATAAAGCAATCGATGTT TTAGATACTGCTTGTGCAAATGTAAAAATAAGTAAAACAAATATACCTCATACTTTGCAAAAAATTAATACTCAAATTAT AGAAAAACAAAGGGAAATTGATTTTCTAAAAAGAGATCACGAAAATGAAATAAAAGATTATCAATCAGATATTCTAAAAC TTCAAGAAGATTTAAAAGAATTAGAAAGAGAGCGTGAAGTTATAACAAATTTATGGAATGAACAAAAATTATTATTAAAC AAAATATACGAAACAAAAGATAAAGAAGAGTTAAGTCTTTTAAATATCAAATTAAATCAATTGCAAAAAGAGTATTCATA TATTTATAAAAATGTTACAAAAGAACAAGTAGCTGAAGTTATTGCTTCATGGACGGGAATACCTTTAGGAAATATGGTTC AAGGACAAATAAAAAATATTATGAAACTTGAAGATAATATTAAAGAGCGAATAATTGGACAAAATGAAGCAATATCTTAT TTAACTACATTCCTACAAATATCAATAGCTGGGTTAAAAAAAGAAGATGCTCCAAATGGAGTATTTTTATTAGTTGGACC AAGTGGCGTTGGCAAAACTGAAACTGCAAAAGCAATCGCTGATTTAATGTATGGTGGAGAGCGATTTATTACTACTATTA ATATGACAGAATTTCAAGAAAAACATACTGTTTCTAGATTGATTGGTTCACCTCCTGGTTATGTTGGATATGGAGATGGT GGTCAATTAACAGATCCTGTTAGAGTTAAACCATATTCAGTTGTATTATTAGATGAAATCGAAAAAGCACATCCTGATAT TTTAAATCTTTTCTATCAAATATTTGATAAGGGAGTAGCAAATGATGGAGAGGGTAGAGTAATAGATTTTAAAAATACAA CTATTATCATGACTTCAAACTTAGCAACAGAAAAGATAACTGAGTTGTGTGTAAGTAAACCTGATTTGACCATGGATGCT TTAACAAAAGAAATTATACCAACTCTTTCTTCTTATTTGCAACCTGCTTTATTAGGAAGAATGAATGTAATTCCATATTT TAATTTAAAAGATGAATCTTTATTTGAAATTGCTAATTTAAAACTAAATGTAATAAAAGATCAATTAATGAAAAAAAATA TCTCACTACAAGTAGATGATAAACTTTTAAAATACATCGTTACATTAAGCAATACAGTAGATACAGGTGCAAGAAATATT GATTTAATTATTAATATCAATATTATGCCAAAACTATCAAAATATATTTTAAATTGCATAGTTAATGATATATCTATTGA TAAGTTAAGTGTGTCTATTAATTTAGACAATGACATATTAATATCTCATGATTAA Protein sequence : MKIELNEIINALDVQTKFYIESSAQRCIERSGNEILIEDILYTMLEKDNSLFNKLLEHYEIDIQEMYNLLQMSTKITNTE STNPIFSTMLVQWLEEAFYTSKMSLEINEITESSLILSLFDNSVKYSTTSYFKLIKNINTNELKELILGLNKKKRERKSS QRTETSELDKYTTNLTKLAKEGKIDPVLCRDDEIKQAIDILLRRRKNNPILVGEAGVGKTAVVEGLALKIINKEVPDYLY EAQILSLDLGALQAGASVKGEFERRLQAVIREIQSSTQNIILFIDEAHTLIGAGGNEGGGDAANLLKPALARGELKTIAA TTWLEYRKYFEKDPALSRRFQKINLLEPSVEQAITILRGLSKKYEDVHNVYIEDDALRSAAILSARYITGRQLPDKAIDV LDTACANVKISKTNIPHTLQKINTQIIEKQREIDFLKRDHENEIKDYQSDILKLQEDLKELEREREVITNLWNEQKLLLN KIYETKDKEELSLLNIKLNQLQKEYSYIYKNVTKEQVAEVIASWTGIPLGNMVQGQIKNIMKLEDNIKERIIGQNEAISY LTTFLQISIAGLKKEDAPNGVFLLVGPSGVGKTETAKAIADLMYGGERFITTINMTEFQEKHTVSRLIGSPPGYVGYGDG GQLTDPVRVKPYSVVLLDEIEKAHPDILNLFYQIFDKGVANDGEGRVIDFKNTTIIMTSNLATEKITELCVSKPDLTMDA LTKEIIPTLSSYLQPALLGRMNVIPYFNLKDESLFEIANLKLNVIKDQLMKKNISLQVDDKLLKYIVTLSNTVDTGARNI DLIININIMPKLSKYILNCIVNDISIDKLSVSINLDNDILISHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-123 | 43 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-115 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Arnit_1747 | YP_003655908.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 1e-142 | 47 |
| Arnit_1747 | YP_003655908.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 8e-151 | 44 |
| Arnit_1747 | YP_003655908.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 2e-110 | 41 |
