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Name : Arnit_0149 (Arnit_0149) Accession : YP_003654322.1 Strain : Arcobacter nitrofigilis DSM 7299 Genome accession: NC_014166 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 139662 - 140621 bp Length : 960 bp Strand : - Note : COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR003016:IPR000644:IPR001347:IPR004800; KEGG: abu:Abu_0051 carbohydrate isomerase KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: DNA sequence : ATGAATTATAACGAGATTGCAAAAGAGGTTTTACTAACTGAAGCGAAGGAGTTAGAAAGAGCCTCTAGGGATAATTCTTT TGACATGAATGCTGCAGTTGAACTTGTTTATAATACAAAAGGTAAACTAATCGTTACAGGCGTTGGTAAATCTGGCTTAG TTGGGACAAAAATAGCTGCAACTCTTGCAAGTACAGGAACTAGTTCTTTTTTCTTACATCCTACAGAAGCTATGCATGGC GATTTAGGAATGATTGGTAAAGATGATACAGTTTTAGCTATATCATACTCAGGAGAGAGTGAAGAGTTGATTCAAATTCT TCCTCACCTAAAAAGATTTGATATTCCAATGATTGCAATGGCAAAAAATCCAAATTCTACTTTAGCAAAATATGCGGACA TTTTTTTTGATATAAATGTTACAAAAGAGGCTTGTCCATTAGATACAGCTCCAACTTCTTCTACAACTTTAACAATGGCT ATGGGTGATGCATTAGCTGTTTGTTTAATGAAAAAAAGAAACTTTCAAAAAAGTGATTTTGCTTCATTTCACCCAGGTGG AAGCTTAGGTAAAAAACTATTTATTAAAGTTTCTGATTTACTTAGAACAGAAGAATTACCAATTGTTTCACGTGGAACTC TTTTAAAAGATGCTATTGTAAGAATGAGTGAAGGTAGACTTGGAAATGTTATAATTACTGATGACAATGAAGTCATTGGC TTATTAAGTGATGGAGATTTAAGAAGAGCTTTAATGGATGATAATTTTTCATTAGAGTGTAAAGTCGAAGAGATTGCAAC TATGAATCCTAAAGTTTTAAACAACAAAGATTTATTAGCTAGTGATGCATTGAAAATTATAGAAGATTATAAGATACAAC TTTTAGTTGTTGTTGATGATAGTAATAAACTTGTTGGTGTATTACATATTCATGATTTAATAGAAGCAGGAATAAAGTAG Protein sequence : MNYNEIAKEVLLTEAKELERASRDNSFDMNAAVELVYNTKGKLIVTGVGKSGLVGTKIAATLASTGTSSFFLHPTEAMHG DLGMIGKDDTVLAISYSGESEELIQILPHLKRFDIPMIAMAKNPNSTLAKYADIFFDINVTKEACPLDTAPTSSTTLTMA MGDALAVCLMKKRNFQKSDFASFHPGGSLGKKLFIKVSDLLRTEELPIVSRGTLLKDAIVRMSEGRLGNVIITDDNEVIG LLSDGDLRRALMDDNFSLECKVEEIATMNPKVLNNKDLLASDALKIIEDYKIQLLVVVDDSNKLVGVLHIHDLIEAGIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-49 | 41 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-50 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 7e-50 | 41 |
