|
Name : Arnit_1251 (Arnit_1251) Accession : YP_003655416.1 Strain : Arcobacter nitrofigilis DSM 7299 Genome accession: NC_014166 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 1223472 - 1224899 bp Length : 1428 bp Strand : + Note : COGs: COG0753 Catalase; InterProIPR002226:IPR018028:IPR010582:IPR011614:IPR 020835; KEGG: cff:CFF8240_1057 catalase; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: A0RPT7 Catalase; PFAM: Catalase; Catalase-related immune- DNA sequence : ATGAAAAAAATTATGACTACAACAGCTGGAAATCCAATCTCGGATAACCAAAATTCAATGACAGCAGGTGAGAGAGGTCC TGTACTTATACAAGATTATCAATTAATAGAAAAACTTGCCCATCAAAATAGAGAAAGAATCCCTGAACGGGTTGTTCATG CAAAAGGAAGCGGTGCTTTTGGTGAACTAGTTATTACAGAAGATATCTCTAAATATACAAAAGCAAAAGTTTTACAAAAG GGTGAAAGTACTAGATTATTACTTAGATTCTCAACAGTTGCTGGAGAAAAAGGTGCAGCAGATGCTGAAAGAGATGTAAG AGGTTTTGCTTTAAAGTTTTATACAAAAGAGGGAAATTGGGATTTAGTTGGAAATAATACTCCTGTATTTTTTATCCGTG ATGCTTATAAATTTCCTGATTTTATTCACACTCAAAAAAGACATCCACAATCAAATCTAAGAAGTAATACAGCAGCTTGG GATTTTTGGTCACTTAGCCCTGAGAGCTTACACCAAGTAACAATTTTGATGTCAGATAGAGGATTACCAAAATCATATAG ACATGTGAATGGATACGGTTCTCACACTTATAGTTTAATCAATGCTCAAGGTGAAAGATTTTGGGTGAAATTTCACTTTA AAACTAAACAAGGTATTGAAACAATTACAAACAAAGAAGCAGAAGCAATAGTTGCAAAAGATAGAGAATCAAATCAAAGA GATTTATTTGAAAATATAGAAAAAGAAAACTATCCAAAATGGAGCTTTGAAATTCAAATTATGACAGATGAAGATGCAAA ATATTGTTCATTTAATCCATTTGATTTAACAAAAGTTTGGCCACATAGTGATTATCCTATGATAAAAGTAGGAGAAATGA CATTAAATGAAAATCCTAAAAACTATTTCAATGAGATAGAACAAGCGTCATTTTCACCATCAAATATTGTTCCAGGTATT AGTTTCTCACCTGATAAGATGTTACAAGCTAGAATCTTCTCTTATCCTGATGCTCATAGATATAGAGTAGGAACACATTA TGAAATGTTGCCAGTAAACAGACCAATAGTAGATGTAAATACTTACCATGCAGATGGAAGTATGAATTATGAAGTAAAAG AAGTAACAGATGCATATTATGAACCAAATAGTTTTAATGGACCAGTTGAAGATAAATCATTTTCAGAACCAGCATTTAAT GTAGGCGACAGTGCTGATAGATATGACCATAGAGTAGGAAATGATGACTTTACACAAGTAACGGCACTTTTTAATTTGAT GAGTGATAATCAAAAAGAACAACTATTTAATAATATCGCTGAAGCTATGGATGGGGTTCCAAGTGAGATTGTAAATAGAC AACTTGCACTTTTTGAAAAAGTACATTCAGATTATAGTGCAGGGGTTAAAAAAGCATTAGGAATTTAA Protein sequence : MKKIMTTTAGNPISDNQNSMTAGERGPVLIQDYQLIEKLAHQNRERIPERVVHAKGSGAFGELVITEDISKYTKAKVLQK GESTRLLLRFSTVAGEKGAADAERDVRGFALKFYTKEGNWDLVGNNTPVFFIRDAYKFPDFIHTQKRHPQSNLRSNTAAW DFWSLSPESLHQVTILMSDRGLPKSYRHVNGYGSHTYSLINAQGERFWVKFHFKTKQGIETITNKEAEAIVAKDRESNQR DLFENIEKENYPKWSFEIQIMTDEDAKYCSFNPFDLTKVWPHSDYPMIKVGEMTLNENPKNYFNEIEQASFSPSNIVPGI SFSPDKMLQARIFSYPDAHRYRVGTHYEMLPVNRPIVDVNTYHADGSMNYEVKEVTDAYYEPNSFNGPVEDKSFSEPAFN VGDSADRYDHRVGNDDFTQVTALFNLMSDNQKEQLFNNIAEAMDGVPSEIVNRQLALFEKVHSDYSAGVKKALGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-133 | 58 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 7e-111 | 48 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-109 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-109 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-109 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-109 | 47 |
