Gene Information

Name : Arnit_1071 (Arnit_1071)
Accession : YP_003655240.1
Strain : Arcobacter nitrofigilis DSM 7299
Genome accession: NC_014166
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 1057283 - 1058986 bp
Length : 1704 bp
Strand : +
Note : COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR011612:IPR006680:IPR017952:IPR017950:IPR 011059:IPR005848:IPR017951; KEGG: abu:Abu_0807 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; PRIAM: Urease; SP

DNA sequence :
ATGAAAATATCAAAAGAAAAATATGCTTCAATGTATGGACCAACAACTGGTGATAGATTTAGACTCTCTGATACATCTTT
AATAGCTAAGATAGAAAAAGATTATACAACTTATGGAGAAGAGAGTAAGTTTGGTGGTGGTAAAACAGTAAGAGATGGTA
TGGCACAAAGTCCAACGGCTGTTGATGTTGCTGATTTGATTATTACAAATGCTGTTATTATTGATTATACAGGTATTTAC
AAAGCTGATATAGGTATCAAAGATGGTGTAATAATAGCTATTGGAAAATCTGGAAATCCAAATCTTTGTGATGGTATTAC
AGAAGGTTTAGAAATAGGAGCAAACACTGAAATATTGTCTGCTGAGGGTAAAATTATAACTGCTGGTGGTATAGATTCTC
ATATCCATTTTATAAGTCCTGGTCAAATTGATGTTGCACTAGCTAGTGGAGTTACTACTATGGTAGGTGGTGGAACTGGA
CCAAATACAGGAACAAATGCCACAACTTGTACACCAGGGGAGTGGAATATAGGTAAGATGATACAAAGTGTTGATAACTT
ACCACTTAACTTTGGTTTTATGGGAAAAGGAAATAGTTCTTGTAAAGAGGCTTTAGAGGTTCAAATAAAAGCTGGAGCTA
TGGGACTAAAACTGCATGAGGATTGGGGAAGTACACCAAAAGCTATTGATACTTGTTTAAGTGTTGCTGATGAATATGAT
GTACAAGTTGCTATTCATACAGATACTTTAAATGAATCAGGTTTTGTAGATAATACAGTTGACTCTTTTAAAGATAGAAC
AATACATACCTTCCATAGTGAAGGAGCAGGTGGTGGACATGCCCCTGATATTATGAAAGTGGCTGGATTAGCTAATGTAT
TACCATCAAGTACTAATCCAACACTGCCATATACAAAAAACACTATAGAAGAACATCTTGATATGCTTATGGTATGTCAT
CACTTAAGTCCAAAGATTCCTGAAGATGTAAGTTTTGCAGAGAGTCGTATTAGAGGCAAGACAATTGCAGCTGAAGATGT
GTTACATGACTTGGGAGCTATTAGTATCACAAGTAGCGATTCACAAGCTATGGGAAGAGTAGGGGAAGTACTTACAAGAA
CTTGGCAAGTGGCAGACTCTATGAAAAAACAAAGAGGTGCTTTAGATGGAGATGATGAATTAAGTGATAATAATAGAATC
AAAAGATATATCGCAAAATATACTATAAATCCAGCAATCGCTTGTGGAATAGATGAGTATGTAGGAAGTGTAGAAGTTGG
CAAGATGGCTGACTTAGTTTTATGGAATAGAGCTTTCTTTGGGATAAAACCTGAGATTATTATCAAAGGTGGATTTATAG
CACTTAGTATGATGGGTGATTCAAATGCCTCAATTCCAACACCTGAACCAAATATGTATAGACCTATGTTTGGAAGTTTA
GGGAAAGCCCCAGCAAAAACAAGTGCAATCTTTACTTCAAATATAGCAATTGAAGAAGGTATAAAAGAGAAACTTGAAAT
CGATAAAGCTGTACTTGCTGTTAAAAATACAAGAAATATAGGTAAAAAAGATATGAAGTTAAATGACTTCATTGGAAATA
TTGAAGTTAATCCTGAAACTTATGATGTAACAGTAAATGGTGAGATAATAGAGTCGAACTATGTGTCAGTAGTACCAATG
GCAAAAAAATATTTTATGTTCTAG

Protein sequence :
MKISKEKYASMYGPTTGDRFRLSDTSLIAKIEKDYTTYGEESKFGGGKTVRDGMAQSPTAVDVADLIITNAVIIDYTGIY
KADIGIKDGVIIAIGKSGNPNLCDGITEGLEIGANTEILSAEGKIITAGGIDSHIHFISPGQIDVALASGVTTMVGGGTG
PNTGTNATTCTPGEWNIGKMIQSVDNLPLNFGFMGKGNSSCKEALEVQIKAGAMGLKLHEDWGSTPKAIDTCLSVADEYD
VQVAIHTDTLNESGFVDNTVDSFKDRTIHTFHSEGAGGGHAPDIMKVAGLANVLPSSTNPTLPYTKNTIEEHLDMLMVCH
HLSPKIPEDVSFAESRIRGKTIAAEDVLHDLGAISITSSDSQAMGRVGEVLTRTWQVADSMKKQRGALDGDDELSDNNRI
KRYIAKYTINPAIACGIDEYVGSVEVGKMADLVLWNRAFFGIKPEIIIKGGFIALSMMGDSNASIPTPEPNMYRPMFGSL
GKAPAKTSAIFTSNIAIEEGIKEKLEIDKAVLAVKNTRNIGKKDMKLNDFIGNIEVNPETYDVTVNGEIIESNYVSVVPM
AKKYFMF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-164 61
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 1e-158 61
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 1e-158 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-164 61
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-164 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-164 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arnit_1071 YP_003655240.1 urease subunit alpha VFG0270 Protein 5e-156 64