Gene Information

Name : Tbis_0950 (Tbis_0950)
Accession : YP_003651566.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1074928 - 1075671 bp
Length : 744 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence :
ATGACCACGATGACCGATGTCCGGATCGCCGTGGCCGCGAGCGGGCTGACCAAGGTGTACGGGCAGGGCGAGACCGCCGT
GCACGCCCTGCGGGGCATCGACGTCGCCTTCGCGGCCGGAGCCTTCACCGCCATCATGGGCCCGTCGGGATCGGGCAAGT
CGACGCTGATGCACTGCCTCGCCGGCCTGGACACCGTGACCAGCGGCACGGTGCGCATCGGCGACGTCGAGATCACGGGC
TTGAACGACCGGCAGCTCACCCGGCTGCGGCGCGAGCGGGTGGGCTTCATCTTCCAGGCGTTCAACCTGCTGCCGACGCT
CACCGCCGAGCAGAACATCCGGCTGCCGCTGGAGATCGCCGGGCGGCGGGCCGACGAGGCGCTCTTCGACCATGTGATCG
ACATCCTCGGCCTGCGCGACCGGCTGACGCACAGGCCGAGCGAGCTCTCCGGCGGCCAGCAGCAGCGGGTCGCCGTGGCC
CGCGCGCTGGTCTGCAAGCCGCAGGTGATCTTCGCGGACGAGCCGACCGGCAACCTCGACTCCCGCACCGGTGCCGAGGT
GCTGTCGTTCCTGCGGCGGTCCGTCAAGGAGCTCGGGCAGACGATCGTGATGGTGACCCACGACCCGGTCGCCGCCGCCT
ACGCCGACCGGGTGGTCTTCCTCCGGGACGGCCTGCTCGTGAGCGAGCTGGCGAATCCGACGCCGCAGAGCGTGCTCGAC
ACCCTGATGGCGCTGGAGGCCTGA

Protein sequence :
MTTMTDVRIAVAASGLTKVYGQGETAVHALRGIDVAFAAGAFTAIMGPSGSGKSTLMHCLAGLDTVTSGTVRIGDVEITG
LNDRQLTRLRRERVGFIFQAFNLLPTLTAEQNIRLPLEIAGRRADEALFDHVIDILGLRDRLTHRPSELSGGQQQRVAVA
RALVCKPQVIFADEPTGNLDSRTGAEVLSFLRRSVKELGQTIVMVTHDPVAAAYADRVVFLRDGLLVSELANPTPQSVLD
TLMALEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-41 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-45 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-45 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-45 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_0950 YP_003651566.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-44 48
Tbis_0950 YP_003651566.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-48 47
Tbis_0950 YP_003651566.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-44 46
Tbis_0950 YP_003651566.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-39 45