Gene Information

Name : Tbis_3430 (Tbis_3430)
Accession : YP_003654012.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4008034 - 4008744 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmr:Mmar10_1823 ABC transporter related

DNA sequence :
GTGGCGGCGCTGGAGATGAGGGACCTGCACAAGCACTACGGCGACTTCCACGCGCTCGACGGCGCGAACCTCACCGTGCC
GGAGGGCTCCCTGTACGGCCTGCTCGGCCCGAACGGCGCGGGCAAGACCACCCTGATGAAGATCGTCGCCGGGCTGCGGC
GTGCGACCTCGGGCCGCATCAGCCTGTTCGGCCGGCCGCACGACCGGCGGCTGCTCACCCGGGTCGGGGCGCTGCTGGAG
TCGCCCGGCCTGTGGCCCCACCTCGACGGGGTCACCCATCTGCGCATCCACGCCCGGCTGCGCGGGGTGCCGCAGACCCG
GATCGACGAGGTGCTGGGGCTGGTGAAGCTCACCGAGGTGCGCACCCGCAAGGTCGCGAAGTACTCCCTCGGCATGCGGT
GGCGGCTCGGCATCGCCATCGCGCTGCTCGGCCGCCCCCGGCTGGTCGTGCTCGACGAGCCGATGAACGGGCTCGACCCG
GTCGGCATCCGGGACATGCGGGCGACGCTGCGGTCACTGGCCGAGGCCGGCACCACCGTCATGGTCTCCAGCCACCAGCT
GGCGGAGATCGCGCAGATCTGCGATCACGTCGGCGTGCTGGTGGCCGGGCGGACCGCGTACGAGGGCGCGCTGCACGGCC
TCGCCGTCGACGGCGACCTCGAAGCGGGCTTCTTCCGCCTGCTCGAGAAGGCGGGTTCCGCGGTGCGCTGA

Protein sequence :
MAALEMRDLHKHYGDFHALDGANLTVPEGSLYGLLGPNGAGKTTLMKIVAGLRRATSGRISLFGRPHDRRLLTRVGALLE
SPGLWPHLDGVTHLRIHARLRGVPQTRIDEVLGLVKLTEVRTRKVAKYSLGMRWRLGIAIALLGRPRLVVLDEPMNGLDP
VGIRDMRATLRSLAEAGTTVMVSSHQLAEIAQICDHVGVLVAGRTAYEGALHGLAVDGDLEAGFFRLLEKAGSAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-33 43
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-33 43
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-33 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-33 43
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-38 41
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 9e-39 41
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 8e-29 41
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 8e-29 41
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-33 41
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-33 41
cdd4 CAA63569.1 - Not tested PaLoc Protein 9e-41 41