Gene Information

Name : Tbis_3270 (Tbis_3270)
Accession : YP_003653853.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3824451 - 3825197 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter related ; K02003

DNA sequence : 
ATGAGCGCGCCGATCGCGCCCGCCCCGGTCCTCGACCTCCGGCAGGTGACCAAGGTGTACGGCGCGGGCGAGACCGCGGT
GCACGCCCTGCGCGGCGTCACCCTCACCGTCGAACGCGGCGACTACGTCGCGATCATGGGGGCGTCCGGCTCGGGCAAGT
CGACCCTGATGAACATCATCGGCTGCCTCGACGTCCCCACCTCCGGCACCTACCTGCTCGACGGCATCGACGTCCGCGCG
CTCAACGAGAACCAGCTCGCCCTGGTGCGGAACCGCAAGGTCGGATTCGTCTTCCAGGCGTTCAACCTCATCCCCAGGAT
GACCGCGCTCGCCAACGTCGAGCTGCCGCTGGCGTACGGTGGGATCAAGGCGGCCGAGCGGCGCCGCCGCGCCCTCGCGG
CGCTCAGGATGGTCGGCCTCGCCGACCGGGTCGGCCACCAGCCCAACCAGCTCTCCGGCGGGCAGCAGCAGCGGGTCGCC
GTGGCCCGCGCCATCGTCACCGCCCCGGCCCTGCTTCTCGCCGACGAACCGACCGGTTCGCTCGACACCGCCTCCGGCCG
GGAGGTGATGCGCATCTTCGACCGGCTCAGCGCGAGCGGCCGCACCATCGTCCTCATCACCCACGAGCCGGACACCGCGG
CGCACGCCAAGCGGGTGATCCGGTTGACGGACGGCCGGATCGTCGAGGACATCCGCCGCTCGCCGGTCTCCGGCCCACCG
CCCCGGCTCGCGGAGGTGACCTCGTGA

Protein sequence : 
MSAPIAPAPVLDLRQVTKVYGAGETAVHALRGVTLTVERGDYVAIMGASGSGKSTLMNIIGCLDVPTSGTYLLDGIDVRA
LNENQLALVRNRKVGFVFQAFNLIPRMTALANVELPLAYGGIKAAERRRRALAALRMVGLADRVGHQPNQLSGGQQQRVA
VARAIVTAPALLLADEPTGSLDTASGREVMRIFDRLSASGRTIVLITHEPDTAAHAKRVIRLTDGRIVEDIRRSPVSGPP
PRLAEVTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_3270 YP_003653853.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-53 51
Tbis_3270 YP_003653853.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-47 49
Tbis_3270 YP_003653853.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-43 45