Gene Information

Name : Tbis_1980 (Tbis_1980)
Accession : YP_003652585.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2291449 - 2293554 bp
Length : 2106 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: dal:Dalk_2752 transketolase

DNA sequence :
TTGAGCAGCTCTAGCCTGGAATGGAGTGACCTCGATCGGCGGGCGGTCGACATCGTGCGGGCCCTCGCCATGGACGCGGT
GGAACGGGCGGGCTCGGGGCACCCGGGCACCGCGATGAGCCTGGCTCCCGCCGCATACCTTCTGTTCCAGCGGGTCCTCC
GCCACGATCCCTCCGATCCCACCTGGGTGGGAAGGGACCGTTTCGTTCTGTCGTGCGGCCACACCAGCCTCACGCTCTAC
ATCCAGCTCTACCTCTCCGGGTACGGCCTCACCCTCGACGACCTGAAGGCGTTCCGCCAGTGGGGCAGCCGCACCCCGGG
CCACCCGGAGTACGGCCACACCGCCGGCGTCGAGACCACCACCGGCCCCCTCGGCCAGGGCATCGGCAACGCGGTCGGCA
TGGCGATGGCCGCCCGCCGCGAGCGCGGGCTCTTCGACCCGGACGCCGCCCCCGGCGAGTCGCCCTTCGACCACATGATC
TGGTGCTTCGCCTCTGAGGGTGACATCGAGGAGGGCATCAGCCACGAGGTGAGCGCGCTCGCCGGCCACCAGAAGCTCGG
CAACCTCTGCGTCGTCTTCGACGCCAACCAGATCTCGATCGAGGACGACACCCGGATCGCGCTCTCCGAGGACATCCTCA
AGCGGTACGAGGCGTACGGCTGGCATGTGATCAACGTCGAGTGGACGCGGGACGACGGTGAGTACGTCGAGGACGTCCAC
GCGCTGTACGAGGCGCTGCAGGCGGCCCGCGCGGAGACGGAGCGGCCCACGTTCATCCGGCTCCGCACGATCATCGGGTG
GCCTGCCCCGAACAAGAAGAACACCGGGAAGATCCACGGCGCGGCGCTCGGCCCGGAGGAGGTCGCGGCGACCAAGCGGA
TCCTCGGCCTCGATCCGGAGAAGGAGTTCTACGTCCCCGGCGACGTGCTCGAGCACGCCCGTGACGTGGTGCGCCGCAAC
CGCCTGCTCCGGGCCGAGTGGGACGAGCGGTTCCAGAAGTGGCGGGCGGCCAACCCCGAGCGCGCCGAGCTGTTCGACCG
GATCTCCCGGCGCGAGCTCCCGGAGGGCTGGCACAAGGTTCTGCCCGCCTTCGAGCCCGGGTCGTCGATCGCGACCCGGA
AGGCCTCCGGCGAGGTGCTCAACGCGCTCGCCCCGGTCCTGCCCGAGCTGTGGGGCGGCTCGGCCGACCTCGCCGAGTCG
AACAACACCACGATGAAGGGCGAGCCGTCCTTCATCCCCGAGGAGCACCAGACCAAGGAGTTCCCCGGCCACAAGTACGG
CAGGACGCTCCACTTCGGGGTGCGCGAGCACGGCATGGGCGCGATCCTCAACGGGATCGCGCTGCACAACGGCACCCGGC
CGTACGGCGGCACCTTCCTCGTGTTCAGCGACTACATGCGCCCGTCGGTCCGGCTGGCCGCGATGATGAAGCTCCCGGTC
ATCTACGTGTGGACGCATGACTCGATCGGGCTCGGCGAGGACGGCCCGACCCACCAGCCGGTCGAGCACCTGTGGTCGCT
GCGCGCCATCCCCGGGCTCGACGTGGTGCGCCCGGCCGACGCCAACGAGACCGCGGCGGCGTGGCGGGCCATCCTCGAGC
ACAACGACCGGCCGGCCGCGCTCTGCCTCACCCGGCAGAACGTGCCGGTGTTCGCGGAGACCGCGGACCCGGGTCACGTG
GCCCGCGGCGGGTACATCCTCCAGGAGGCGTCGACCGGCCAGCCCGCCGTGCTGATCATCGCCACGGGGAGCGAGGTGCA
GCTCGCGGTGGCGGCGCGCGAGACGCTGGAGGCGCAGGGCATCCCGACCCGGGTCGTGTCGATGCCGTGCGTCGAGTGGT
TCAAGGCCCAGGACCTGGCCTACCAGCAGACCGTGCTCCCGCCGTCGGTGCGGGCCCGGGTCGCGGTCGAGGCCGGGGTG
ACTTTCGGCTGGCGTGAGTTCGTGGGCGATGCCGGGGAAGTCCTTGGATTGGACCACTTCGGCGCCTCCGCGCCCTACAA
GACGGTGTTCGAGCAGTTCGGCCTCACCCCCGACCGCGTCGTGGCCGCGGCGAAGGCGAGCCTGGCCAGGACCGGCGCCG
ACAAGGGCGAGACGACCGGCAACTGA

Protein sequence :
MSSSSLEWSDLDRRAVDIVRALAMDAVERAGSGHPGTAMSLAPAAYLLFQRVLRHDPSDPTWVGRDRFVLSCGHTSLTLY
IQLYLSGYGLTLDDLKAFRQWGSRTPGHPEYGHTAGVETTTGPLGQGIGNAVGMAMAARRERGLFDPDAAPGESPFDHMI
WCFASEGDIEEGISHEVSALAGHQKLGNLCVVFDANQISIEDDTRIALSEDILKRYEAYGWHVINVEWTRDDGEYVEDVH
ALYEALQAARAETERPTFIRLRTIIGWPAPNKKNTGKIHGAALGPEEVAATKRILGLDPEKEFYVPGDVLEHARDVVRRN
RLLRAEWDERFQKWRAANPERAELFDRISRRELPEGWHKVLPAFEPGSSIATRKASGEVLNALAPVLPELWGGSADLAES
NNTTMKGEPSFIPEEHQTKEFPGHKYGRTLHFGVREHGMGAILNGIALHNGTRPYGGTFLVFSDYMRPSVRLAAMMKLPV
IYVWTHDSIGLGEDGPTHQPVEHLWSLRAIPGLDVVRPADANETAAAWRAILEHNDRPAALCLTRQNVPVFAETADPGHV
ARGGYILQEASTGQPAVLIIATGSEVQLAVAARETLEAQGIPTRVVSMPCVEWFKAQDLAYQQTVLPPSVRARVAVEAGV
TFGWREFVGDAGEVLGLDHFGASAPYKTVFEQFGLTPDRVVAAAKASLARTGADKGETTGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-124 47
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-124 45