Gene Information

Name : Tbis_0018 (Tbis_0018)
Accession : YP_003650648.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 21805 - 22563 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_0297 ABC transporter related

DNA sequence : 
GTGATCGAAATAACGAACGTCACCAAACGGTACGGCGAGCACGTCGTCGTCGACCGGGTGTCGCTCACCATCCCCCGCGG
CGGCGTGACCTCGATCATCGGCGCCAACGGCGCGGGCAAGTCCACCCTGCTGTCGATCATCAGCCGCCTGATCCCCGCCG
ACGAGGGCACCGTGACCGTTGACGGCATGGACGTCGCCACCACCCCCACCGAGCGGCTCGCCCGGCGGCTCGCCATCCTC
CGCCAGGACAACCACATGCCGGTCCGGCTCACCGTGCGGGAGCTCGTCGCCTTCGGCCGGTTCCCGCACACCCAGGGCCG
GCTCACCGCCGAGGACCACCGGCTCGTCGACGAGGCGATGCGCTACTTCGAGCTCACCGACCTCGCCGACCGCCACCTCG
ACCAGCTCTCCGGCGGCCAGCGGCAGCGCGCGTTCGTCGCGATGGTGCTCTGCCAGGACACCGACTACGTGCTGCTCGAC
GAGCCGCTCAACAACCTCGACATGCGGCACTCGGTGCACATGATGCGCCGCCTGCGCCGCATGGCCGACGACTACGGCAA
GACCGTGGTCATCGTGGTGCACGACATCAACTTCGCCTCGTGCCACTCCGACACGATCGTGGCGATGAAGAACGGCAAGG
TGATCGCCCAGGGTCCGACCGCCGAGATGATGACCCCGGAGATCCTCGCCGAGGTCTACGACCTCGGCATCGACGTGCAC
GAGCTCTCCGGCCACCGCATCGGCGTCTACTTCGCCTGA

Protein sequence : 
MIEITNVTKRYGEHVVVDRVSLTIPRGGVTSIIGANGAGKSTLLSIISRLIPADEGTVTVDGMDVATTPTERLARRLAIL
RQDNHMPVRLTVRELVAFGRFPHTQGRLTAEDHRLVDEAMRYFELTDLADRHLDQLSGGQRQRAFVAMVLCQDTDYVLLD
EPLNNLDMRHSVHMMRRLRRMADDYGKTVVIVVHDINFASCHSDTIVAMKNGKVIAQGPTAEMMTPEILAEVYDLGIDVH
ELSGHRIGVYFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-41 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-36 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_0018 YP_003650648.1 ABC transporter-like protein BAC0164 Protein 4e-41 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_0018 YP_003650648.1 ABC transporter-like protein VFG1042 Protein 3e-41 47
Tbis_0018 YP_003650648.1 ABC transporter-like protein VFG0925 Protein 6e-37 42