Gene Information

Name : Tbis_1623 (Tbis_1623)
Accession : YP_003652230.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1878595 - 1879659 bp
Length : 1065 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD

DNA sequence :
ATGGCAAATCTACCGGGCGCCACCACGGCGCCCGCCGCGCCCCCCGGCGGGCGAGCGGGGCGCTCCCGGCGCACCACGGC
CCTGATCACAGGGCTGATCGCCGTGGCGGGCGCCCTGGTGCTCATATCCGCGCTCAGCCTGGCCTTCGGCGCCCGGCAGG
TGCCGCTGCCCACCGTGATCGAAGCCCTCACCGCCCCGGACGGCTCCGGTGACCACACGGTCATCCGCGAGCTCCGGGTG
CCGCGGACCGTGCTCGGCATCGCGGTCGGGGCCGCCCTCGGCCTCGCCGGGGCGCTGATGCAGAGCCTGACCCGCAACCC
GCTCGCCGACCCCGGCCTCCTCGGGGTCAACCAAGGCGCCGCCTTCGGGGTGGCCGCCGCGATCAGCCTGCTCGGGATCA
CCGATCCGGTCGGGTACGTGTGGTTCGCCTTCGGCGGCGCCGCGGTCGCCTCGGCGCTCGTCTACTCGCTCGGCTCGGCG
GGCCGCGCCGGGGCCAGCCCCACCCGGCTCGCCCTGGCCGGGGTCGCCCTCGGCATGGTGTTCATCGCCGCCACCTCGCT
GATCCTCCGGATGGACGCGCGGACGTTCGACCGCATGCGGTTCTGGATGACCGGCTCCCTCGCCGCCCAGACCCCGGACG
TCCTCGTGCGGCTCCTCCCCTTCATCGCGGCCGGGATGGTCATCGGGCTGCTGCTCGCGCGGCCGCTCAACCTGCTCGCC
CTCGGCGACGAGACCGGGCGGGCGCTCGGGCTCGCGGTGGGCCGCACCCGTATGGTCACCGGCATGGCGGTGACCCTCCT
GTGCGGCTCGGCCACCGCGGCGGCCGGGCCCCTGTGGTTCGTCGGCCTCGCCGTACCGCACGCGGTGCGCACGCTGGTCG
GCCCCGACCTGAAGTGGGTGCTCCCCTACTCCGCCCTGCTCGCCCCCGTGCTGCTCCTCGGCGCCGACATCGTCGGGCGG
GTCATCGCGTCCCCCGGCGAGGTGCAGGCCGGCATCATGTGCTCGGTCCTCGGCGCCCCCGTCTTCATCCTCCTCGCCAG
GCGGAGGAGGCTGGCCGGGCTATGA

Protein sequence :
MANLPGATTAPAAPPGGRAGRSRRTTALITGLIAVAGALVLISALSLAFGARQVPLPTVIEALTAPDGSGDHTVIRELRV
PRTVLGIAVGAALGLAGALMQSLTRNPLADPGLLGVNQGAAFGVAAAISLLGITDPVGYVWFAFGGAAVASALVYSLGSA
GRAGASPTRLALAGVALGMVFIAATSLILRMDARTFDRMRFWMTGSLAAQTPDVLVRLLPFIAAGMVIGLLLARPLNLLA
LGDETGRALGLAVGRTRMVTGMAVTLLCGSATAAAGPLWFVGLAVPHAVRTLVGPDLKWVLPYSALLAPVLLLGADIVGR
VIASPGEVQAGIMCSVLGAPVFILLARRRRLAGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-25 44
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-25 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-25 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_1623 YP_003652230.1 transport system permease VFG0926 Protein 2e-36 49