Gene Information

Name : Tbis_1622 (Tbis_1622)
Accession : YP_003652229.1
Strain : Thermobispora bispora DSM 43833
Genome accession: NC_014165
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 1877498 - 1878598 bp
Length : 1101 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: yen:YE3620 iron-enterobactin transporter permease

DNA sequence :
ATGAACCCGCGGCACCAGGCTCCGCTCCACGCCGCCACGGCACCCGAGGAACCGCGCCCGCCCCGCGAGTCACCGGGCAG
GGTGCCGTCGATCCACGCGCTCCGGCTCGGCCGGTGGTCGATCCGGGTCCGGCCGCGGTCGGCCGCCACCGGCCTCGCCC
TGCTCATCGGCACGGCGGTGGTGACCGTCGTCGCCCTGATGACCGGCGAGTTCACCCTGCCGCCCGGCGACGTGCTGGCC
GCCCTGTTCGGGGACGGCACCCCGGTCGCCGAGTTCGTCGTCACCAAGCTCCGCGCGCCCCGGGTGGTGACCGGCCTGCT
CGTCGGCGCCGCGTTCGCGCTGAGCGGGGCGATCTTCCAGAACCTCACCCGCAACCCGCTCGGCAGCCCGGACTTCATCG
GCTTCACCCAGGGCGCGGCGACCGGCGCCATCGTCGCCGTCATCGTCAACGCCACGGCGCTGCAGGTCGCCGCCGGGGCG
CTCGCCGGCTGCCTCGGCAGCGCGGTGCTCGTCTACCTGCTCGCCTACCGGCGCGGCGTCCTCGGGTACCGGCTGATCCT
CGTCGGGATCGGCGTGAACGCGCTGCTCCTCGCCGTGAACGACTACCTGCTCACCCGCGCGAACATCAACGACGCCGCCA
CCGCGGGCGCCTGGATCACCGGCAGCCTCAGCGGGCGCGGCTGGGACCACGCCGTCCCGGTCGCGGTGGCGCTGGCCGTG
CTGCTGCCCGCCTGCGCCCTGCTGGCACGGCCCCTGCGCCAGCTCGAGCTCGGCGACGACCTGGCGGTGGCCTCGGGCGT
CCGGGCCGAGGTGGTCCGCGCGGCCGCGGTGCTGATCGGGGTGCTGCTGTGCGCGATCGCCACGGCCGCCGCCGGGCCGG
TGATGTTCATCGCCATGGCCGCCCCGCAGCTCGCCAGGCGCCTCGCCCGGTCGCCGGGGATCACCATGCTGACCTCCGCG
CTCATGGGCGCGCTGCTGCTCACCGCCGCCGACGTGCTGGCGCAGCGGCTGCTCGCCCCCACCCAGCTGCCGGTCGGCGT
GCTGACGGCCGCGATCGGCGGCTGCTACCTGACCTTCCTCCTGCGAAAGGAACGACGCTGA

Protein sequence :
MNPRHQAPLHAATAPEEPRPPRESPGRVPSIHALRLGRWSIRVRPRSAATGLALLIGTAVVTVVALMTGEFTLPPGDVLA
ALFGDGTPVAEFVVTKLRAPRVVTGLLVGAAFALSGAIFQNLTRNPLGSPDFIGFTQGAATGAIVAVIVNATALQVAAGA
LAGCLGSAVLVYLLAYRRGVLGYRLILVGIGVNALLLAVNDYLLTRANINDAATAGAWITGSLSGRGWDHAVPVAVALAV
LLPACALLARPLRQLELGDDLAVASGVRAEVVRAAAVLIGVLLCAIATAAAGPVMFIAMAAPQLARRLARSPGITMLTSA
LMGALLLTAADVLAQRLLAPTQLPVGVLTAAIGGCYLTFLLRKERR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-30 44
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-30 44
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 2e-30 44
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-30 44
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tbis_1622 YP_003652229.1 transport system permease VFG0928 Protein 1e-26 48